Parental gene:

PPP2CA, ENSBTAG00000000469

Aliases:None
Description:Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Source:UniProtKB/Swiss-Prot;Acc:P67774]
Organism:Cow (Bos taurus)
Coordinates:7:47425979..47450747(-)


>ENSBTAG00000000469
ATGGACGAGAAGGTGTTCACCAAGGAGCTGGACCAGTGGATCGAGCAGCTGAACGAGTGCAAGCAGCTGTCTGAGTCCCA
GGTTAAGAGCCTCTGCGAGAAGGCTAAAGAAATCCTGACAAAAGAATCCAATGTGCAAGAAGTTCGATGTCCAGTCACTG
TCTGTGGAGATGTGCATGGGCAATTTCATGATCTCATGGAACTGTTTAGAATTGGTGGCAAATCACCAGATACAAATTAC
TTGTTTATGGGCGATTATGTTGACAGAGGATATTATTCAGTGGAAACAGTTACTCTGCTTGTAGCTCTTAAGGTTCGTTA
CCGTGAACGTATCACCATTCTTCGAGGAAATCATGAGAGCAGACAGATCACACAAGTATATGGTTTCTACGATGAGTGTT
TAAGGAAATACGGAAATGCAAATGTTTGGAAGTATTTTACAGACCTTTTTGACTATCTTCCTCTCACTGCCTTGGTGGAT
GGGCAGATCTTCTGTCTACATGGTGGCCTCTCACCATCCATAGATACACTGGATCACATCAGAGCACTTGATCGCCTACA
AGAAGTTCCTCATGAGGGTCCAATGTGTGACTTGCTGTGGTCAGATCCAGATGACCGTGGAGGTTGGGGTATATCTCCTC
GAGGAGCTGGTTACACCTTTGGGCAGGATATTTCTGAGACATTTAATCATGCCAATGGCCTCACGTTGGTGTCTAGAGCT
CATCAGCTGGTGATGGAGGGATATAACTGGTGCCATGACCGAAATGTAGTAACGATTTTCAGTGCTCCAAACTATTGTTA
TCGTTGTGGTAACCAAGCTGCAATCATGGAACTTGATGATACTCTAAAATACTCTTTCTTGCAGTTTGACCCAGCACCTC
GCAGAGGCGAGCCACATGTTACTCGTCGTACCCCAGACTACTTCCTGTAA

Library Parental gene expression (RPM)
ERP005899_liver 105 .76 RPM
ERP005899_muscle 141 .53 RPM
SRP017611_brain 169 .15 RPM
SRP017611_kidney 138 .64 RPM
SRP017611_liver 54 .74 RPM
SRP030211_testis 78 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002653 ortholog_one2one 1 retrogene
retro_acar_69,
Bos taurus ENSBTAG00000009245 within_species_paralog 3 retrogenes
retro_btau_1199, retro_btau_1750, retro_btau_704,
Dasypus novemcinctus ENSDNOG00000013011 ortholog_one2one 4 retrogenes
retro_dnov_1025, retro_dnov_1844, retro_dnov_2100, retro_dnov_2122,
Echinops telfairi ENSETEG00000007561 ortholog_one2one 2 retrogenes
retro_etel_1233, retro_etel_659,
Felis catus ENSFCAG00000029685 ortholog_one2one 1 retrogene
retro_fcat_1086,
Mustela putorius furo ENSMPUG00000010169 ortholog_one2one 1 retrogene
retro_mputfur_633,
Sorex araneus ENSSARG00000005447 ortholog_one2one 3 retrogenes
retro_sara_296, retro_sara_385, retro_sara_715,
Sarcophilus harrisii ENSSHAG00000016632 ortholog_one2one 3 retrogenes
retro_shar_313, retro_shar_428, retro_shar_471,
Tursiops truncatus ENSTTRG00000016859 ortholog_one2one 1 retrogene
retro_ttru_1584,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1754 80.25 50.49
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Download FASTA sequences of all ENSBTAG00000000469 retrocopies