Parental gene:

GALNT11, ENSPTRG00000019891

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:153247731..153275282(+)


>ENSPTRG00000019891
ATGGGAAGTGTCACAGTTCGGTATTTCTGTTATGGGTGCCTTTTTACATCTGCGACCTGGACAGTTTTGCTTTTTGTTTA
TTTCAACTTCAGTGAAGTGACTCAGCCACTTAAGAATGTGCCCATCAAGGGGTCTGGGCCCCACGGACCATCTCCAAAAA
AATTCTATCCCCGTTTCACTCGAGGCCCAAGTCGAGTGCTCGAGCCACAGTTCAAAGCAAACAAAATTGACGATGTGATA
GACAGTCGTGTTGAAGATCCAGAAGAAGGCCACTTGAAATTCTCTTCTGAATTAGGTATGATTTTTAATGAACGCGATCA
GGAGTTGAGAGACTTGGGCTATCAGAAACATGCTTTTAATATGCTTATCAGTAACCGCTTGGGCTACCACAGAGATGTGC
CAGACACAAGGAATGCCGCATGTAAAGAAAAGTTCTACCCACCTGACCTGCCAGCTGCTAGTATTGTTATCTGTTTCTAT
AATGAAGCGTTTTCTGCCTTGCTTCGGACAGTGCACAGTGTCATAGACCGCACGCCGGCACACCTGCTTCATGAGATCAT
CCTTGTGGATGATGATAGTGACTTTGATGATTTGAAAGGAGAACTAGATGAATATGTCCAAAAATACCTCCCTGGAAAAA
TTAAAGTCATAAGAAATACAAAGCGTGAGGGGTTGATTCGAGGGAGAATGATTGGCGCGGCCCACGCGACAGGAGAAGTC
CTTGTGTTCCTGGACAGCCACTGTGAAGTGAATGTGATGTGGCTGCAGCCCTTGCTGGCCGCCATCCGTGAGGACCGGCA
CACCGTGGTGTGCCCAGTGATTGACATCATCAGCGCCGACACGCTGGCCTACAGCTCGTCCCCTGTCGTCCGCGGAGGGT
TCAACTGGGGGCTGCACTTCAAATGGGATCTTGTCCCCCTTTCTGAGCTAGGAGGAGCGGAGGGAGCCACTGCACCAATA
AAGTCACCAACAATGGCTGGAGGTTTGTTTGCCATGAACAGACAGTATTTCCATGAACTTGGACAGTATGATAGTGGCAT
GGATATCTGGGGAGGAGAAAATTTGGAAATATCATTTCGGATCTGGATGTGTGGCGGTAAGCTCTTCATCATCCCTTGCT
CTAGAGTAGGACACATTTTCCGAAAAAGGCGACCATATGGATCTCCCGAAGGCCAGGACACCATGACACACAACTCTTTG
CGGCTGGCACATGTCTGGTTGGATGAATACAAGGAGCAGTATTTTTCCTTAAGACCTGACCTGAAGACGAAAAGCTATGG
CAATATCAGTGAGCGTGTGGAACTGAGAAAGAAGTTGGGCTGTAAATCATTTAAATGGTATTTGGATAATGTATACCCAG
AGATGCAGATATCTGGGTCCCACGCCAAACCCCAACAACCCATTTTTGTCAATAGAGGGCCAAAACGACCCAAAGTCCTT
CAACGTGGAAGGCTCTATCACCTCCAGACCAACAAATGCCTGGTGGCCCAGGGCCGCCCAAGTCAGAAGGGAGGTCTCGT
GGTGCTTAAGGCCTGTGACTACAGTGACCCAAATCAGATCTGGATCTATAATGAAGAGCATGAATTGGTTTTAAATAGTC
TCCTTTGTCTAGATATGTCAGAGACTCGCTCATCAGACCCGCCACGGCTCATGAAATGCCACGGGTCAGGAGGATCCCAG
CAGTGGACCTTTGGGAAAAACAATCGGCTATACCAGGTGTCAGTTGGACAGTGCCTGAGAGCAGTGGATCCCCTGGGTCA
GAAGGGCTCTGTTGCCATGGCGATCTGCGATGGCTCCTCTTCACAGCAGTGGCATTTGGAAGGTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 56 .45 RPM
SRP007412_cerebellum 49 .83 RPM
SRP007412_heart 13 .87 RPM
SRP007412_kidney 257 .10 RPM
SRP007412_liver 14 .47 RPM
SRP007412_testis 8 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001121 ortholog_one2one 1 retrogene
retro_chof_1535,
Homo sapiens ENSG00000178234 ortholog_one2one 1 retrogene
retro_hsap_402,
Gorilla gorilla ENSGGOG00000008784 ortholog_one2one 1 retrogene
retro_ggor_399,
Nomascus leucogenys ENSNLEG00000004613 ortholog_one2one 1 retrogene
retro_nleu_1573,
Pan troglodytes ENSPTRG00000021180 within_species_paralog 1 retrogene
retro_ptro_777,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_308 73.53 71.55
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Download FASTA sequences of all ENSPTRG00000019891 retrocopies