Parental gene: | PKM2, ENSPPYG00000006613 |
| Aliases: | PKM2, PKM |
| Description: | pyruvate kinase isozyme M1 [Source:RefSeq peptide;Acc:NP_001127083] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 15:69558388..69591022(-) |
>ENSPPYG00000006613
ATGTCGAAGCCACATAGTGAAGCCGGGACTGCCTTCATTCAGACCCAGCAGCTGCATGCAGCCATGGCTGACACATTCCT
GGAGCACATGTGCCGCCTGGACATTGATTCACCACCCATCACAGCCCGGAACACTGGCATCATCTGTACCATTGGCCCAG
CTTCCCGATCAGTGGAGACGTTGAAGGAGATGATTAAGTCTGGAATGAATGTGGCTCGTCTGAACTTCTCTCATGGAACT
CATGAGTACCACGCGGAGACCATCAAGAATGTGCGCACAGCCACGGAAAGCTTTGCTTCTGACCCCATCCTCTACCGGCC
CGTTGCTGTGGCTCTAGACACTAAAGGACCTGAGATCCGAACTGGGCTCATCAAGGGCAGCGGCACTGCAGAGGTGGAGC
TGAAGAAGGGAGCCACTCTCAAAATCACACTGGATAATGCCTACATGGAAAAGTGTGACGAGAACATCCTATGGCTGGAC
TACAAGAACATCTGCAAGGTGGTGGAAGTGGGCAGCAAGATCTACGTGGATGATGGGCTTATTTCTCTCCAGGTGAAGCA
GAAAGGTGCCGACTTCCTGTTGACGGAGGTGGAAAATGGTGGCTCCTTGGGCAGCAAGAAGGGTGTGAACCTTCCTGGGG
CTGCTGTGGACTTGCCTGCTGTGTCGGAGAAGGACATCCAGGATCTGAAGTTTGGGGTCGAGCAGGATGTTGATATGGTG
TTTGCGTCATTCATCCGCAAGGCATCTGATGTCCATGAAGTTAGGAAGGTCCTGGGAGAGAAGGGAAAGAACATCAAGAT
AATCAGCAAAATCGAGAATCATGAGGGGGTTCGGAGGTTTGATGAAATCCTGGAGGCCAGTGATGGGATCATGGTGGCTC
GTGGTGATCTAGGCATTGAGATTCCTGCAGAGAAGGTCTTTCTTGCTCAGAAGATGATGATTGGACGGTGCAACCGAGCT
GGGAAGCCTGTCATCTGTGCTACTCAGATGCTGGAGAGCATGATCAAGAAGCCCCGCCCCACTCGGGCTGAAGGCAGTGA
TGTGGCCAATGCAGTCCTGGATGGAGCTGACTGCATCATGCTGTCTGGAGAAACAGCCAAAGGGGACTATCCTCTGGAGG
CTGTGCGCATGCAGCACCTGATTGCCCGTGAGGCAGAGGCCGCCATCTACCACTTGCAATTATTTGAGGAACTCCGCCGC
CTGGCGCCCATTACCAGCGACCCCACAGAAGCCACCGCCGTGGGTGCCGTGGAGGCCTCCTTCAAGTGCTGCAGTGGGGC
CATAATCGTCCTCACCAAGTCTGGCAGGTCTGCTCACCAGGTGGCCAGATACCGCCCACGTGCCCCCATCATTGCTGTGA
CCCGGAATCCCCAGACAGCTCGTCAGGCCCACCTGTACCGTGGCATCTTCCCTGTGCTGTGCAAGGACCCAGTCCAGGAG
GCCTGGGCTGAGGACGTGGACCTCCGCGTGAACTTTGCCATGAATGTTGGCAAGGCCCGAGGCTTCTTCAAGAAGGGAGA
TGTGGTCATTGTGCTGACCGGATGGCGCCCTGGCTCCGGTTTCACCAACACCATGCGTGTTGTTCCTGTGCCGTGA
ATGTCGAAGCCACATAGTGAAGCCGGGACTGCCTTCATTCAGACCCAGCAGCTGCATGCAGCCATGGCTGACACATTCCT
GGAGCACATGTGCCGCCTGGACATTGATTCACCACCCATCACAGCCCGGAACACTGGCATCATCTGTACCATTGGCCCAG
CTTCCCGATCAGTGGAGACGTTGAAGGAGATGATTAAGTCTGGAATGAATGTGGCTCGTCTGAACTTCTCTCATGGAACT
CATGAGTACCACGCGGAGACCATCAAGAATGTGCGCACAGCCACGGAAAGCTTTGCTTCTGACCCCATCCTCTACCGGCC
CGTTGCTGTGGCTCTAGACACTAAAGGACCTGAGATCCGAACTGGGCTCATCAAGGGCAGCGGCACTGCAGAGGTGGAGC
TGAAGAAGGGAGCCACTCTCAAAATCACACTGGATAATGCCTACATGGAAAAGTGTGACGAGAACATCCTATGGCTGGAC
TACAAGAACATCTGCAAGGTGGTGGAAGTGGGCAGCAAGATCTACGTGGATGATGGGCTTATTTCTCTCCAGGTGAAGCA
GAAAGGTGCCGACTTCCTGTTGACGGAGGTGGAAAATGGTGGCTCCTTGGGCAGCAAGAAGGGTGTGAACCTTCCTGGGG
CTGCTGTGGACTTGCCTGCTGTGTCGGAGAAGGACATCCAGGATCTGAAGTTTGGGGTCGAGCAGGATGTTGATATGGTG
TTTGCGTCATTCATCCGCAAGGCATCTGATGTCCATGAAGTTAGGAAGGTCCTGGGAGAGAAGGGAAAGAACATCAAGAT
AATCAGCAAAATCGAGAATCATGAGGGGGTTCGGAGGTTTGATGAAATCCTGGAGGCCAGTGATGGGATCATGGTGGCTC
GTGGTGATCTAGGCATTGAGATTCCTGCAGAGAAGGTCTTTCTTGCTCAGAAGATGATGATTGGACGGTGCAACCGAGCT
GGGAAGCCTGTCATCTGTGCTACTCAGATGCTGGAGAGCATGATCAAGAAGCCCCGCCCCACTCGGGCTGAAGGCAGTGA
TGTGGCCAATGCAGTCCTGGATGGAGCTGACTGCATCATGCTGTCTGGAGAAACAGCCAAAGGGGACTATCCTCTGGAGG
CTGTGCGCATGCAGCACCTGATTGCCCGTGAGGCAGAGGCCGCCATCTACCACTTGCAATTATTTGAGGAACTCCGCCGC
CTGGCGCCCATTACCAGCGACCCCACAGAAGCCACCGCCGTGGGTGCCGTGGAGGCCTCCTTCAAGTGCTGCAGTGGGGC
CATAATCGTCCTCACCAAGTCTGGCAGGTCTGCTCACCAGGTGGCCAGATACCGCCCACGTGCCCCCATCATTGCTGTGA
CCCGGAATCCCCAGACAGCTCGTCAGGCCCACCTGTACCGTGGCATCTTCCCTGTGCTGTGCAAGGACCCAGTCCAGGAG
GCCTGGGCTGAGGACGTGGACCTCCGCGTGAACTTTGCCATGAATGTTGGCAAGGCCCGAGGCTTCTTCAAGAAGGGAGA
TGTGGTCATTGTGCTGACCGGATGGCGCCCTGGCTCCGGTTTCACCAACACCATGCGTGTTGTTCCTGTGCCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1056 .99 RPM |
| SRP007412_cerebellum | 584 .42 RPM |
| SRP007412_heart | 414 .49 RPM |
| SRP007412_kidney | 391 .89 RPM |
| SRP007412_liver | 70 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013504 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018473 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000000653 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005062 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004506 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000023454 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000032294 | ortholog_one2one | 8 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011329 | ortholog_one2many | 6 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000010300 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_429 | 88.58 | 61.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2834 | 81.97 | 55.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3645 | 78.27 | 58.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000006613 retrocopies