Parental gene:

HNRNPH3, ENSGALG00000003947

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein H3 [Source:RefSeq peptide;Acc:NP_001012610]
Organism:Chicken (Gallus gallus)
Coordinates:6:10166620..10171427(+)


>ENSGALG00000003947
ATGGACTGGACTGGAAAGCACAACGGGCCCACCGATACAACCAACGATGGGACGGTGGTGCGGCTCCGAGGCCTGCCCTT
CGGCTGTAGCAAGGAAGAGATCGTTCAGTTTTTCCAAGGGTTGGAAATCGTGCCAAATGGGATAACATTGACGCTGGACT
ACCAGGGGAGAAGCACAGGGGAGGCCTTCGTGCAGTTTGCTTCAAAGGAGATAGCAGAAAATGCTCTGGGGAAACACAAG
GAAAGAATAGGGCACAGATACATTGAAATCTTCAAAAGTAGTAAGAGTGAAATCAGAGGATTCTCTGACATGCCGAGAAG
AATGATGGGACAACAACGACCTGGACCATATGATAGACCATTAGGAGGAAGAGGGGGTTATTATGGAGCTGGGCGTGGAA
GTATGTATGACAGAATGCGTCGAGGAGGTGGTGGATATGACGGTGGATATGGTGGCTTTGATGATTATGGTGGCTATAAT
AACTATGGCTATGGAAATGATGGCTATGATGACCGAATGAGAGATGGGAGAGGCATGGGAGGACATGGTTATGGAGCTGG
AGATGCAGGTTCAGGTTTCCATGGTGGCGGTCATTTTGTTCACATGAGAGGACTGCCTTTTCGAGCGACAGAAAATGATA
TTGCAAACTTCTTCTCACCATTGAATCCTATAAGAGTTCACATTGATATTGGGGCAGATGGAAGAGCCACAGGCGAGGCA
GATGTGGAATTTGTAACACATGAGGATGCAGTAGCTGCTATGTCCAAGGATAAAAATCACATGCAACATCGATACATTGA
ACTGTTCCTGAATTCAACTGCTGGAGGTGGTTCTGGAATGGGAGGCTATGGCAGAGATGGAATGGATCAAGGTTATGGCT
CTGTTGGTAGAATGGGAATGGGTAATAATTACAGTGGCGGTTATGGAACTCCTGATGGCTTGGGCGGCTACAGTCGTGGC
AGTGGAAATAGTGGAGGATACTATGGGCAAGGCAGTATGGGTGGAGGAGGATGGCGTGGGATGTATTGA

Library Parental gene expression (RPM)
SRP007412_brain 103 .54 RPM
SRP007412_cerebellum 131 .96 RPM
SRP007412_heart 121 .01 RPM
SRP007412_kidney 285 .58 RPM
SRP007412_liver 123 .00 RPM
SRP007412_testis 344 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010365 ortholog_one2one 1 retrogene
retro_acar_184,
Ailuropoda melanoleuca ENSAMEG00000018064 ortholog_one2one 1 retrogene
retro_amel_1375,
Bos taurus ENSBTAG00000014316 ortholog_one2many 2 retrogenes
retro_btau_1504, retro_btau_470,
Callithrix jacchus ENSCJAG00000019154 ortholog_one2many 2 retrogenes
retro_cjac_292, retro_cjac_578,
Equus caballus ENSECAG00000007190 ortholog_one2one 1 retrogene
retro_ecab_912,
Macropus eugenii ENSMEUG00000013139 ortholog_one2one 1 retrogene
retro_meug_1627,
Mustela putorius furo ENSMPUG00000011997 ortholog_one2one 1 retrogene
retro_mputfur_1469,
Oryctolagus cuniculus ENSOCUG00000004443 ortholog_one2one 3 retrogenes
retro_ocun_1136, retro_ocun_1379, retro_ocun_1615,
Ictidomys tridecemlineatus ENSSTOG00000011676 ortholog_one2one 1 retrogene
retro_itri_647,
Tursiops truncatus ENSTTRG00000013322 ortholog_one2one 2 retrogenes
retro_ttru_1744, retro_ttru_1766,
Vicugna pacos ENSVPAG00000011814 ortholog_one2one 1 retrogene
retro_vpac_403,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggal_16 80.94 92.98
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGALG00000003947 retrocopies