Parental gene:

GAPDH, ENSETEG00000013749

Aliases:None
Description:glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:4141]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_2197:86230..89991(+)


>ENSETEG00000013749
ATGGTGAATGTCCGAATGACTGGATTTGGCCGCATTGGGCGTCTGGTCACCAGGGCTGCTTTCGAATCTGGCAAAGTGGA
CATTGTTGCCATCAATGACCCTTTCATTGATCTGCACTACATGGTCTACATGTTCCAGTATGATTCCACCCACAGCAAGT
TCAATGGCGCTGTCAAGGGTGAGAATGGGAAGCTTAACATCAATGGGAAGGCCATCTCCATCTTCCAGGAGCGAGATCCC
GCCAACATCAAGTGGGCTGAGGCCGGTGCTGAGTATGTCGTAGAGTCCACTGGTGTCTTCACCACCGTAGAGAAGGCTGG
GGCTCACTTGAAGGGCGGTGCCAAAAGGGTGATCATCTCTGCCCCTTCTGCTGATGCCCCCATGTTTGTGATGGGCGTGA
ACCACGAGAAGTATGATAACTCCCTCAAGATTGTCAGCAATGCCTCCTGCACCACCAACTTAGCCCCCCTGGCCAAGGTC
ATCCATGACAATTTTGGCATCGTGGAAGGACTCATGACCACACATGCCATCACTGCCACCCAGAAGACTGTGGACGGCCC
CTCTGGGAAACTCTGGCGTGATGGCCGTGGGGCTGCTCAGAACATCATCCCCGCATCTACTGGCGCTGCCAAGGCTGTGG
GCAAGGTTATCCCCGAGCTGAACAGGAAACTGACTGGCATGGCCTTCCGTGTCCCCACCCCCAATGTGTCCGTCGTGGAT
CTCACCTGCCGTCTGGAGAAAGCTGCCAAGTACGATGACATCAAGAAGGTGATGAAGCAGGCAGCCGATGGGCCCCTAAA
GGGCATCCTGGGCTACACTGAGGACCAGGTAGTCTCCTGTGACTTCAACAGTGACCCCCACTCTTCCACCTTTGATGCTG
GGGCTGGCATTGCCCTCAACGACCACTTTGTCAAGCTCATTTCCTGGTATGACAATGAATTTGGCTACAGCCACAGAGTG
GTGGACCTCATGGTCCACATGGCCTCCAAGGAGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006675 ortholog_one2one 5 retrogenes
retro_amel_1189, retro_amel_146, retro_amel_1792, retro_amel_1826, retro_amel_549,
Ailuropoda melanoleuca ENSAMEG00000014329 possible_ortholog 35 retrogenes
retro_amel_1050, retro_amel_1082, retro_amel_1134, retro_amel_1174, retro_amel_1229, retro_amel_1235, retro_amel_1253, retro_amel_1308, retro_amel_1538, retro_amel_1550, retro_amel_1598, retro_amel_1605, retro_amel_1614, retro_amel_1658, retro_amel_1776, retro_amel_1801, retro_amel_1802, retro_amel_187, retro_amel_1900, retro_amel_1904, retro_amel_268, retro_amel_294, retro_amel_387, retro_amel_443, retro_amel_471, retro_amel_601, retro_amel_605, retro_amel_641, retro_amel_738, retro_amel_750, retro_amel_762, retro_amel_852, retro_amel_899, retro_amel_961, retro_amel_992,
Bos taurus ENSBTAG00000014731 ortholog_one2one 4 retrogenes
retro_btau_1175, retro_btau_1417, retro_btau_834, retro_btau_887,
Canis familiaris ENSCAFG00000015077 possible_ortholog 4 retrogenes
retro_cfam_122, retro_cfam_214, retro_cfam_3, retro_cfam_7,
Callithrix jacchus ENSCJAG00000008234 possible_ortholog 1 retrogene
retro_cjac_1548,
Cavia porcellus ENSCPOG00000026350 ortholog_one2many 1 retrogene
retro_cpor_125,
Gorilla gorilla ENSGGOG00000009553 possible_ortholog 30 retrogenes
retro_ggor_1142, retro_ggor_1143, retro_ggor_1260, retro_ggor_1450, retro_ggor_1621, retro_ggor_1659, retro_ggor_1889, retro_ggor_1902, retro_ggor_1982, retro_ggor_2126, retro_ggor_2224, retro_ggor_2443, retro_ggor_2477, retro_ggor_2500, retro_ggor_2991, retro_ggor_3004, retro_ggor_341, retro_ggor_376, retro_ggor_412, retro_ggor_424, retro_ggor_427, retro_ggor_428, retro_ggor_429, retro_ggor_430, retro_ggor_431, retro_ggor_459, retro_ggor_804, retro_ggor_921, retro_ggor_922, retro_ggor_926,
Loxodonta africana ENSLAFG00000002780 possible_ortholog 3 retrogenes
retro_lafr_421, retro_lafr_46, retro_lafr_954,
Macaca mulatta ENSMMUG00000018679 possible_ortholog 33 retrogenes
retro_mmul_1016, retro_mmul_1469, retro_mmul_1529, retro_mmul_1535, retro_mmul_1713, retro_mmul_1776, retro_mmul_1812, retro_mmul_1833, retro_mmul_1839, retro_mmul_1893, retro_mmul_2056, retro_mmul_2116, retro_mmul_2133, retro_mmul_2134, retro_mmul_2220, retro_mmul_2252, retro_mmul_2253, retro_mmul_2413, retro_mmul_2430, retro_mmul_2461, retro_mmul_2562, retro_mmul_2572, retro_mmul_480, retro_mmul_494, retro_mmul_513, retro_mmul_523, retro_mmul_524, retro_mmul_525, retro_mmul_526, retro_mmul_605, retro_mmul_650, retro_mmul_776, retro_mmul_784,
Monodelphis domestica ENSMODG00000018066 possible_ortholog 41 retrogenes
retro_mdom_1060, retro_mdom_1089, retro_mdom_1104, retro_mdom_1137, retro_mdom_1161, retro_mdom_1184, retro_mdom_1233, retro_mdom_1241, retro_mdom_1317, retro_mdom_1358, retro_mdom_1384, retro_mdom_142, retro_mdom_1494, retro_mdom_1544, retro_mdom_1610, retro_mdom_1631, retro_mdom_1661, retro_mdom_1691, retro_mdom_1698, retro_mdom_1743, retro_mdom_1810, retro_mdom_1908, retro_mdom_2022, retro_mdom_275, retro_mdom_310, retro_mdom_354, retro_mdom_382, retro_mdom_497, retro_mdom_531, retro_mdom_552, retro_mdom_584, retro_mdom_590, retro_mdom_591, retro_mdom_628, retro_mdom_678, retro_mdom_766, retro_mdom_816, retro_mdom_828, retro_mdom_832, retro_mdom_835, retro_mdom_863,
Mustela putorius furo ENSMPUG00000016891 possible_ortholog 28 retrogenes
retro_mputfur_1027, retro_mputfur_105, retro_mputfur_1051, retro_mputfur_1091, retro_mputfur_1152, retro_mputfur_1197, retro_mputfur_1198, retro_mputfur_1229, retro_mputfur_1278, retro_mputfur_1422, retro_mputfur_1461, retro_mputfur_1483, retro_mputfur_1630, retro_mputfur_244, retro_mputfur_300, retro_mputfur_31, retro_mputfur_317, retro_mputfur_380, retro_mputfur_481, retro_mputfur_513, retro_mputfur_555, retro_mputfur_612, retro_mputfur_717, retro_mputfur_789, retro_mputfur_817, retro_mputfur_842, retro_mputfur_88, retro_mputfur_925,
Mus musculus ENSMUSG00000057666 possible_ortholog 109 retrogenes
retro_mmus_1029, retro_mmus_1082, retro_mmus_1136, retro_mmus_1193, retro_mmus_1249, retro_mmus_1319, retro_mmus_1328, retro_mmus_136, retro_mmus_1365, retro_mmus_1371, retro_mmus_1467, retro_mmus_1474, retro_mmus_1480, retro_mmus_1615, retro_mmus_1692, retro_mmus_1721, retro_mmus_1728, retro_mmus_1886, retro_mmus_1922, retro_mmus_1957, retro_mmus_1983, retro_mmus_1985, retro_mmus_2009, retro_mmus_2020, retro_mmus_2030, retro_mmus_2100, retro_mmus_211, retro_mmus_2119, retro_mmus_2122, retro_mmus_2148, retro_mmus_2158, retro_mmus_2175, retro_mmus_2206, retro_mmus_2216, retro_mmus_2248, retro_mmus_2298, retro_mmus_2370, retro_mmus_2371, retro_mmus_2389, retro_mmus_2463, retro_mmus_2477, retro_mmus_2481, retro_mmus_2512, retro_mmus_2556, retro_mmus_2587, retro_mmus_2623, retro_mmus_2626, retro_mmus_2647, retro_mmus_2681, retro_mmus_2755, retro_mmus_2761, retro_mmus_2764, retro_mmus_2848, retro_mmus_2872, retro_mmus_2911, retro_mmus_2912, retro_mmus_2913, retro_mmus_2914, retro_mmus_2915, retro_mmus_2920, retro_mmus_2932, retro_mmus_2943, retro_mmus_300, retro_mmus_3036, retro_mmus_3064, retro_mmus_3120, retro_mmus_3137, retro_mmus_3140, retro_mmus_3148, retro_mmus_3151, retro_mmus_3188, retro_mmus_3193, retro_mmus_3197, retro_mmus_3216, retro_mmus_3228, retro_mmus_3306, retro_mmus_3335, retro_mmus_3336, retro_mmus_3357, retro_mmus_3377, retro_mmus_3445, retro_mmus_3514, retro_mmus_3575, retro_mmus_3650, retro_mmus_3658, retro_mmus_3693, retro_mmus_3716, retro_mmus_3814, retro_mmus_416, retro_mmus_437, retro_mmus_48, retro_mmus_553, retro_mmus_608, retro_mmus_619, retro_mmus_628, retro_mmus_635, retro_mmus_698, retro_mmus_745, retro_mmus_765, retro_mmus_766, retro_mmus_787, retro_mmus_811, retro_mmus_893, retro_mmus_914, retro_mmus_921, retro_mmus_946, retro_mmus_952, retro_mmus_976, retro_mmus_996,
Ornithorhynchus anatinus ENSOANG00000004492 ortholog_one2one 1 retrogene
retro_oana_81,
Rattus norvegicus ENSRNOG00000018630 possible_ortholog 4 retrogenes
retro_rnor_107, retro_rnor_335, retro_rnor_407, retro_rnor_91,
Rattus norvegicus ENSRNOG00000030638 possible_ortholog 2 retrogenes
retro_rnor_1571, retro_rnor_1777,
Sarcophilus harrisii ENSSHAG00000014953 possible_ortholog 4 retrogenes
retro_shar_178, retro_shar_330, retro_shar_40, retro_shar_533,
Sus scrofa ENSSSCG00000000694 ortholog_one2one 2 retrogenes
retro_sscr_1213, retro_sscr_572,
Tursiops truncatus ENSTTRG00000016094 ortholog_one2one 2 retrogenes
retro_ttru_654, retro_ttru_707,
Xenopus tropicalis ENSXETG00000033975 ortholog_one2one 1 retrogene
retro_xtro_70,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_69 91.37 82.78
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2. retro_etel_90 78.83 81.27
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3. retro_etel_127 88.82 99.09
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4. retro_etel_150 86.87 100.00
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5. retro_etel_163 68.40 95.47
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6. retro_etel_180 87.00 95.47
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7. retro_etel_184 87.18 57.70
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8. retro_etel_209 90.64 79.46
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9. retro_etel_212 74.58 70.39
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10. retro_etel_213 72.05 67.67
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11. retro_etel_243 87.61 67.37
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12. retro_etel_290 89.52 100.00
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13. retro_etel_330 80.51 93.05
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14. retro_etel_339 83.64 81.57
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15. retro_etel_340 84.07 53.78
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16. retro_etel_365 77.23 66.16
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17. retro_etel_397 77.60 56.50
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18. retro_etel_432 88.53 65.26
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19. retro_etel_440 59.63 63.44
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20. retro_etel_463 71.12 55.59
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21. retro_etel_489 71.59 51.66
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22. retro_etel_495 89.00 90.03
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23. retro_etel_504 90.91 85.50
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24. retro_etel_536 90.12 100.00
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25. retro_etel_557 73.31 70.09
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26. retro_etel_586 73.40 54.68
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27. retro_etel_589 57.29 56.80
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28. retro_etel_600 81.85 100.00
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29. retro_etel_611 83.52 53.47
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30. retro_etel_618 83.09 100.00
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31. retro_etel_621 72.16 52.27
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32. retro_etel_624 87.23 84.29
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33. retro_etel_649 68.82 100.00
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34. retro_etel_653 71.20 91.84
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35. retro_etel_770 69.72 64.35
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36. retro_etel_780 87.57 54.98
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37. retro_etel_790 73.26 50.76
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38. retro_etel_792 90.73 93.96
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39. retro_etel_798 81.57 99.09
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40. retro_etel_802 84.76 61.63
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41. retro_etel_810 74.84 91.54
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42. retro_etel_874 83.33 51.06
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43. retro_etel_895 65.97 57.40
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44. retro_etel_899 86.23 100.00
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45. retro_etel_906 72.67 92.75
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46. retro_etel_931 64.09 52.87
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47. retro_etel_934 69.95 63.14
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48. retro_etel_935 58.59 57.10
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49. retro_etel_968 72.55 90.63
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50. retro_etel_969 84.18 99.70
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51. retro_etel_987 72.88 52.57
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52. retro_etel_1011 86.89 61.03
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53. retro_etel_1037 90.12 100.00
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54. retro_etel_1070 71.56 67.37
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55. retro_etel_1117 82.77 96.07
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56. retro_etel_1132 96.71 100.00
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57. retro_etel_1153 74.18 72.51
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58. retro_etel_1171 87.11 76.44
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59. retro_etel_1183 93.42 95.77
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60. retro_etel_1214 82.94 51.06
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61. retro_etel_1215 62.94 58.01
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62. retro_etel_1247 75.82 99.70
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63. retro_etel_1249 70.61 93.05
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64. retro_etel_1255 59.73 64.05
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65. retro_etel_1257 69.08 88.82
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66. retro_etel_1258 72.88 90.03
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67. retro_etel_1266 67.30 62.54
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68. retro_etel_1320 90.42 78.25
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69. retro_etel_1349 84.86 55.29
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70. retro_etel_1352 96.70 100.00
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71. retro_etel_1381 76.74 63.44
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72. retro_etel_1386 82.58 100.00
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73. retro_etel_1389 87.50 66.47
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74. retro_etel_1408 86.77 94.56
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75. retro_etel_1419 91.89 100.00
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76. retro_etel_1422 71.64 99.09
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77. retro_etel_1431 79.41 79.76
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78. retro_etel_1437 85.42 100.00
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79. retro_etel_1470 67.01 57.10
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80. retro_etel_1473 82.93 100.00
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81. retro_etel_1490 90.56 52.87
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82. retro_etel_1511 86.15 87.61
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83. retro_etel_1538 86.19 54.08
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84. retro_etel_1550 88.02 72.21
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85. retro_etel_1563 92.78 58.01
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86. retro_etel_1570 69.37 64.95
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87. retro_etel_1588 86.99 73.72
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88. retro_etel_1601 91.59 100.00
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89. retro_etel_1608 91.96 92.75
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90. retro_etel_1620 85.28 89.73
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91. retro_etel_1635 72.68 57.10
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92. retro_etel_1641 75.94 55.59
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93. retro_etel_1674 56.21 100.00
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94. retro_etel_1679 86.69 91.54
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95. retro_etel_1702 89.41 70.69
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96. retro_etel_1738 86.28 97.89
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97. retro_etel_1746 91.02 100.00
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98. retro_etel_1759 71.75 52.57
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99. retro_etel_1769 87.45 80.66
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100. retro_etel_1776 69.57 68.28
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101. retro_etel_1780 67.03 53.78
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102. retro_etel_1840 72.84 68.58
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103. retro_etel_1869 72.82 57.70
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104. retro_etel_1895 92.76 65.56
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105. retro_etel_1897 91.32 100.00
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106. retro_etel_1949 74.48 70.39
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107. retro_etel_1970 69.85 59.21
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108. retro_etel_1976 71.89 64.35
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109. retro_etel_1982 85.07 100.00
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110. retro_etel_1989 97.91 71.30
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111. retro_etel_2033 77.42 64.35
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112. retro_etel_2076 59.06 50.76
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113. retro_etel_2152 82.74 100.00
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114. retro_etel_2161 71.58 56.50
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115. retro_etel_2173 74.56 84.29
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116. retro_etel_2198 86.67 53.78
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117. retro_etel_2202 90.75 100.00
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118. retro_etel_2210 79.84 72.81
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Download FASTA sequences of all ENSETEG00000013749 retrocopies