Parental gene: | MTERFD1, ENSCHOG00000007893 |
| Aliases: | None |
| Description: | MTERF domain containing 1 [Source:HGNC Symbol;Acc:24258] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_5070:19488..36962(-) |
>ENSCHOG00000007893
ATGGCCCTCTCAGCCCAGCAGATACCCAGATGGTTCAACTCAATTAAATTGGGTAGCTTCATCAATGCTACACAACCCAG
CATACATTTTCAGAGACCAGGAAGAAAATTATTGCGTGGCTCTTCTGCTAAGCCTCTGATATCCTCTGACAATGGTGTAC
TCCAGTGGGGATTTAAGACTTTCACGACTTCCTCCTTATGGAATAGTTTCCAGCATACCAACACAAGTAGGCAAGAGAAT
AATTCTGCCCAAAGCACTCAGCTTCCTTCTGTGAATGAACAGTCACAGAAGACACAAACACCCAACTTTGATTCTGAGCT
GTGTTTAGAAAAACTGGAAGATTTACCTCCATTGTCTCCATTGCAACCAATTTCCGAGAAAGAGGCTATTCAAATTATTG
CAGACCCTCTGTTGCCCCCAGTTTCATTCACACTTCGAGACTATGTGGATCATTCTGAGACTCTGCAGAAGTTAGTGCTT
CTAGGGGTCGATTTGTCCAAGATAGAAAAACATTCTGATGCAGCCAACCACCTTCTGAGACTGGATTTTGAGAAAGACTT
TAAGAAAATACTCCTGTTTCTTAAAGATTTGGGTATAGAGGATAACCAACTGGGAGCATTCTTGACTAAAAATTATGCCA
TTTTCTCTGAAGACCTTGAAAATCTTAAGATCAGGGTGGCTTACCTACAGTCAAAAAAGTTCAGTAAGACAGATATTGCA
CAGATGGTCAGAAAGGCACCATTTTTGCTGAGTTTTTCGGTGGAAAGGCTGGATAACAGATTGGGATTTTTTCAGAAAGA
ACTTGAACTTAATGTGAAGAAGACTAGAGATCTGGTAATTCGTCTCCCAAGGCTGCTAACTGGAAGTCTAGAGCCTGTGA
AAGAAAATATGAAGGTTTATCGTCTTGAACTTGGTTTTAAACACAATGAAATTCAACATATGATCACCAGAATCCCAAAA
ATGTTAACTGCAAATAAAAGGAAACTTACTGACACTTTTGATTATGTGCACAACGTGATGCAGATTCCCCACCACATCAT
TGTAAGGTTCCCACAGGTATTTAATACAAAGTTGTTAAAAATCAAAGAAAGACATTTGTTTCTTACCTATTTAGGAAGAG
CACAGTATGATCCAGCAAAATCTAACTACATCTCTTTGGACAAACTAGTATCTATTCCTGATGAAATATTTTGTGAAGAG
ATTGCCAAAGCCTCAGTACAGGACTTTGAAAAATTCTTAAAAACTCTTTAG
ATGGCCCTCTCAGCCCAGCAGATACCCAGATGGTTCAACTCAATTAAATTGGGTAGCTTCATCAATGCTACACAACCCAG
CATACATTTTCAGAGACCAGGAAGAAAATTATTGCGTGGCTCTTCTGCTAAGCCTCTGATATCCTCTGACAATGGTGTAC
TCCAGTGGGGATTTAAGACTTTCACGACTTCCTCCTTATGGAATAGTTTCCAGCATACCAACACAAGTAGGCAAGAGAAT
AATTCTGCCCAAAGCACTCAGCTTCCTTCTGTGAATGAACAGTCACAGAAGACACAAACACCCAACTTTGATTCTGAGCT
GTGTTTAGAAAAACTGGAAGATTTACCTCCATTGTCTCCATTGCAACCAATTTCCGAGAAAGAGGCTATTCAAATTATTG
CAGACCCTCTGTTGCCCCCAGTTTCATTCACACTTCGAGACTATGTGGATCATTCTGAGACTCTGCAGAAGTTAGTGCTT
CTAGGGGTCGATTTGTCCAAGATAGAAAAACATTCTGATGCAGCCAACCACCTTCTGAGACTGGATTTTGAGAAAGACTT
TAAGAAAATACTCCTGTTTCTTAAAGATTTGGGTATAGAGGATAACCAACTGGGAGCATTCTTGACTAAAAATTATGCCA
TTTTCTCTGAAGACCTTGAAAATCTTAAGATCAGGGTGGCTTACCTACAGTCAAAAAAGTTCAGTAAGACAGATATTGCA
CAGATGGTCAGAAAGGCACCATTTTTGCTGAGTTTTTCGGTGGAAAGGCTGGATAACAGATTGGGATTTTTTCAGAAAGA
ACTTGAACTTAATGTGAAGAAGACTAGAGATCTGGTAATTCGTCTCCCAAGGCTGCTAACTGGAAGTCTAGAGCCTGTGA
AAGAAAATATGAAGGTTTATCGTCTTGAACTTGGTTTTAAACACAATGAAATTCAACATATGATCACCAGAATCCCAAAA
ATGTTAACTGCAAATAAAAGGAAACTTACTGACACTTTTGATTATGTGCACAACGTGATGCAGATTCCCCACCACATCAT
TGTAAGGTTCCCACAGGTATTTAATACAAAGTTGTTAAAAATCAAAGAAAGACATTTGTTTCTTACCTATTTAGGAAGAG
CACAGTATGATCCAGCAAAATCTAACTACATCTCTTTGGACAAACTAGTATCTATTCCTGATGAAATATTTTGTGAAGAG
ATTGCCAAAGCCTCAGTACAGGACTTTGAAAAATTCTTAAAAACTCTTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000004188 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004303 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1333 | 82.32 | 72.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1757 | 75.66 | 52.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_2268 | 94.48 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000007893 retrocopies