RetrogeneDB ID: retro_ttru_1912

Retrocopy location

• Organism: Dolphin (Tursiops truncatus)
• Coordinates: scaffold_98519:108441..114604(+)
• Located in intron of: None

Retrocopy information

• Ensembl ID: None
• Aliases: None
• Status: NOVEL

Parental gene information

• Parental gene symbol: SETD2
• Ensembl ID: ENSTTRG00000015870
• Aliases: None
• Description: SET domain containing 2 [Source:HGNC Symbol;Acc:18420]

Sequence

>retro_ttru_1912
ATGGAAGAAAGAGGAAAGGATTCTTCAAAATTAGAAGGAGAATCCAAAAGGACTTCAGAAAATGAAACAATGAAAAGATG
TTATTCTCCCACTAATGAACAGGGATTCCGACGCGGGTCATCATATTCCAAGCACGGTAAGAGTGCTTCCTGTTATAAAT
CTGCCCCCTTCAAAACCTGCACCCAAGTCTGATAAATTTAAAAATTCTTTCTGTTGTACAGAATTGAATGAGGAAATCAA
ACAGTCTCATTGTTTTAGTTTACAGACTCCTCGTTCAAAAGGTAGTGAATTAAGAGTGATTAGTAAAGTTCCTGAAAGAG
AGAAGATTGGGTCTCCTCCATCAAATCGATTAAATGATTCACCTACTTTTAAAAAGCTAGATGAATCACCTGTTTTTAAG
TCTGAATTTATAGGACATGATAGCCATGATAGTATTAAGGAATTAGACTCTTTATGTAAAGTGAAGAATGATCAATTAAG
AAGTTATTGTCCCACCGAATTTAATATAAACGGATCTCCTGGGGCAGAATCTGATTTGGCAACATTTTGCACTTCTAAAC
GTGACACTGTTTTGATGTCTTCTGATGACAGTGTGACTGGATCAGAGGTATCCCCTTTGGTCAAAACGTGCATGCTTTCA
TCAAATGGATTTCAAAACATTAATAGATGTAAAGAAAAAGACTTGGATGATACTCGCATGCAGAACAGTAAGTCAGAAAG
CCCATTTAGAGAAACAGAACCTCCAGTGTCGCCACACCAGGATCAACTCATATCTTTGCCAGTTATGACTATAGATTATT
CCAAAACAATAGTTAAAGAACCAGTTGATGTGAGAGTTTCTTGCTGTAAAACCAATGATTCAGATATATACTGTACTTCA
AACGACAACCCCCCTTCTTTGTGTCATTCCGGAGCTGAAAATACTGAGCCTTTAGTAACGAATATTTCTTCAAATAGCTT
CATGGACGTGCATTTGAAATCAAAAACAGTTATATGTGATAATGGAAGTCTGACAGATCAGCACTCAGAATTTGCATGTG
GAGAATATAAGCAGAGTGTTGGTAGTACTAGTTCAGCTTCTATTAATCATTTTGATGATTTATATCCACCTACAGGGAGC
TCATGTATTGCTTCATCTCTTCAGAGTCTTCCACCAGGGACAAACGTAGACGGTTTAACTCTCTTGCAATGTGGAGAGAA
TACATCTCCAGTCTTGGATGCTGTGCTGAAGAGTAAAAGCTCAGAGTTTTTAAAGCATGCAGAGAAAGAAATAATAGAAG
TAGCTAGTGGCCTTCCTGATTCAGGAAGAGGATTTGCTTCCTGGGAAAACAGGCATAATAATGGACTATCTGGGAAATGT
GTGCAAGAGGCTCAAGAAGAAGGGAACTCCATACTGCCTGATAGAAGAGGAAGACCAGAAATCTCTTTAGATGAAGACGG
TGGAAGAGGACAGGCACATACTTCTGATGACTCAGAAGTTGTATTTTCTTCTTGTGCTTTGAATTTAATCATGGAGGACA
GTGATGGTGTAACAAATACCTTAAAATGTGACAGTAGTGGTCATGCCTCAGAGATTGTGTCCACTGTCCATGAAGATTAT
TCTGGTTCTTCCGAAAGTTCAAGTGACTCGGAAGATACAGATTCTGATGATAGCAGTATTCCAAGAAACCATCTTCAGTC
TATGGTGGTTGTGCCAAAGAATTCTACTTTGCCCATGGAAGAAACAAGTCCTTGTTCTTCTCAGAGCAGTCAAAGTTACA
GACACTATTCTGACCACAGGGAAGATGAGCGATTGGAGCCAAGGATGCATTCATATGAGGAAAAATTTGAGAGCATAGCA
AGTAAAGCCTGTCCTCAAACTGAGAAGTTCTTCTTTCACAAAGCAACAGAGAAGAATTCAGAAATCTCTTTTACACAGCC
CATCCAAAAACAGATAGATAATCACATGTCTGAAATTGCTTATCCTCAGAGTGATGGGGTTGATAGTACAAGTCATACAG
ACATAAAATCTGACCCTCTAGGTCATCCAAATTCTGAGGAAGCAGTGAAAGCCAAAATAACTTCTAGGCAGCAAGAAGAG
CTGCCAGTTTATTCTCCTGATGATTCTGAAGATGTCTCAAGTAAGTCTCGGCAACAGACCACTTTCCCTAACAGGCCAGA
TAGTAGACTGGGAAAAACACAGTCAAATTTTTCTTCTTGTGAGATCTCCCGAGTGGATGGCTTCCGTTCATCATCGGAAG
AGCTCAGAAACCTAGGGTGGGACTTCTCTCAACAAGAAAAGCCTACTACCACATATCAGCAACCTGACAGCAGCTATGGA
GCCTGTGGTGGACATAAGTATCAGCAAAGTGCAGAACAGTATAGTGGGACATGTAATTACTGGCAAGCCAACGGCTACTG
GGATCCAAGATCAGCAGGTAGACCGCCTGGAACTGGGGTTGTGTATGATCTAATTCAAGGGCAGGTACCAGATTCCTTAA
CAGATGACCGTGAAGAGGAGGAGAATTGGGATCAACGTGGAGGATCTCGCTTTTCAGACCAGTCCAATAAATTTTTTCTG
TCCCTTCAGAAGGACAAGGGGTCCGTGCAAGCACCTGAAATAAGCAGCAATTCCATTAAGGACTCTTTAGCTGTGAGTGA
GGAGAAAGACCTTTCAAAAAACTTAGAACAAAATGATAGGAAAGATAGAGGGCCTCTTAAAAAAAGGAGACAGGAATTGG
AGAGTGATTCTGAGAGTGATGGTGAGCTTCAGGACAGAAAGAAAGTTAGAGTGGAGGTAGAGCAGGGAGAGACAGCAGTG
CCTCTAGGCTCAGCATTGGTTGGGCCTTCGTGTGTCATGAAGGACTTCAGGGACCCAGAGTGGTGGAAGGAGTGTGCCAA
ACAAGGGAAGATGCCTTCTTACTTTGATCTGATTGAATAAAATGTTTATTTAACAGAAAGAAAGAAGAATAAATCCCATC
GGGATATTAAGCGAATGCAGTGTGAGTGTACACCTCTTTCTAAAGATGAAAGAGCTCAAGGTGAAATAGCATGTGGGGAA
GATTGTCTTCATCGTCTCCTCATGATTGAATGTTCGTCTCGTTGTCCAAATGGGGATTATTGTTCCAATAGACGGTTTCA
AAGAAAACAGCATGCAGATGTGGAAGTCATACTCACAGAAAAGAAAGGCTGGGGCTTGAGAGCTGCTAAAGATCTTCCTT
CGAACACCTTTGTCCTGGAATATTGTGGAGAGGTACTTGATCGTAAAGAGTTTAAGGCCCGGGTAAAGGAGTATGCACGA
AACAGAAACAGCCACTACTATTTCATGGCCCTGAAGAATGATGAGATAATAGATGCCACTCAGAAAGGAAACTGCTCCCG
TTTCATGAATCACAGCTGTGAACCAAACTGTGAGGCTCAGAAATGGACTGTGAACGGACAACTGAGAGTTGGGATTTTTA
CCACCAAACTGGTTCCTTCAGGCTCAGAGTTAACATTTGACTATCAGTTCCAGAGATATGGCAAGGAAGCACAGAGACGT
TTCTGTGGGTCGGCTAATTGCCGGGGTTACCTGGGAGGAGAGAACAGAGTCAGCCTCAGAGCAGCACGAGGGAAAATGAA
GAAAGAACGATCTCGGAAGAAGGATTCGGTGGATGGAGAGCTAGAAGCTCTGATGGAGAATGGTGAGGGTCTCTCTGATA
AAAACCAGGTGCTCAGCTTATCCTGGCTAACGGTTAGAATTGAAACTTTGGAACAGAAACTTACCTGTCTCAAGCTCATA
CAGAACACATATTCACAGTCTTGCCTGAAGTCCTTTCTGGAACGTCATGGGCTGCCTTTGTTGTGGATCTGGATGGCAGA
ACTACGTGATGGCCGGGAAAGTAACCAGAAGCTTCAGGAAGAGATTATAAAGACTTTGGAACATTTACCCATTCCTACTG
AAAATATGTTGGAGGAAAGCAAAGTGCTTCCCATTATTCAACGTTGGTCTCAAACCAAGACTGCTGTCCCTCAGCTGAGC
GAAGGAGATGGGTATTCTAGCGAGAATACATCACGTGCTCACACACCACTCAACACACCTGATCCTTCCACCAAGCTGAG
CATAGAAGCTGACACAGACACCCCCAAGAAGCTAAAGTTTCGCAGACTTAAAATTATAAGTGAAAATGGCATGGACAGTG
CGATCTCTGATGCTACCAGCGAGCTAGAAGGCAAGGATGGCAAAGAGGACCTTGACCAGTTAGAAAACGTCCCTATAGAA
GAAGAGGAACAACAGCTACGCACTCAACAGCTGCCTGAATCTAAAGTTGATAGTGACATTGCTGTGGAGGCCATTAAGCT
ACCCACATCTGAACCAGAGGCTGACACTGAAATAGAGCCTAAGAGAGCAATGGCACAAAACTAGACGAACCTATTGCTGA
GGAAACACCATCCCAAGATGAAGAGGAGGGTGTATCTGATGTGGAGAGTGAGAGGAGCCAGAACAGCCACATAAAACAGT
AGATATAAGTGATTTGGCCACCAAGCTCCTGGACAGTTGGAAAGACCTAAAGGAGGTATATCGAATTCCAAAGAAAAGGC
AAACTGAAAAGGAGAGCACAATAACCGAACGAGGAAGGGATGCTTTGGGCTTCAGAGATCAAACAGTTGCCCCAAAGACT
CCTAACAGGTCAAGAGAGAGAGACCCAGACAAACAAACTCAAAATAAAGAGAAAAGGAAACGAAGGGGCTCCCTCTCACC
ACCACCTTCTGCCTATGAGCGGGGAACAAAAAGGCCAGGTGGCAGATATGATACACCAACTTCTAAAAAGAAAGTACGAA
TTCAAGATCGCAATCAACTTTCTACAGAGGAGCGTCGCAAGTTGTTTGAGCAGGAGGTAGCTCAGCGGGAGGCTCAAAAA
CAACAGCAGCAGATGCAGAACCTGCGAATGACGTCTCCACTGCCCTGTGACACTCTTGGCTACCATGCCCCTCATCACCC
CTTTGCTGGCTACCCACCAGGTTACCCCATGCAGGCCTATGTGGATCCCAGCAATCTTAATGCTGGAAAGGTGCTCCTCC
CCACACCCAGCATGGATCCTGTGTGTTCTCCTTCTCCTTATGATCATTCTCAGCCCTTGGTGGGACATTCTACAGAACCC
CTTGCTGCCCCTCCACCTGTGCCCATGGTGCCACATGTGGCAGCCCCTGTGGAAGTTTCCAGTTCACAGTATGTGGCCCA
AAGTGATGGGGTGGTACACCAAGACTCCAGGGTCACCGTCCTGCCACTGCCAGCCCCAGGCCCAGTCCAGGGACAGAATT
ATGGTGTTTGGGATTCAAACCAACAGTCCGTGAGTGTACAGCAGCAGTACTCTCCTGCACAGTCTCAAGCAACCTTATAT
CATCAAGGACAGGCTGCTCCAACTGTCTGTGGTGTGACGTCACCCTATTCACAGACAACTCCACCAACTGTACAGAGTTA
TGCCAGCCAAGTCTTCAGTACATCCAGGGACAGCAGATTCTCACAGCTCACCCACAAGGAGTGGTGGTACAGCCAGCCAC
AGCCGTGACTACAATAGTTGCACCAGGGCAGCCTCAGCCCTTCCAGCCACCTGAAATGGTTGTGACAAATAACCTCTTGG
ACTTACCACCCCCATCTCCTCACAAACCAAAAACCACTGTCTTACCTCCCAACTGGAAGACAGCCCGAGACCCAGAAGGG
AAGATTTACTACTCCCATGTGATCACAAGGCAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAG
CCTTGAGCATGAAGCTGAGATGGACCTGGGAACCCCAACATATGATGAAAATCCCATGAAGACCTCAAAAAAGCCTAAGA
CAGCAGAAGCAGACGCCTCCAGTGAACTGGCTAAGAAAAGCAAACAAGTATTCAGAAAAGAGATGTCCCAGTTCATCGTC
CAGTGCCTGAACCCTTACTGGAAACCTGACTGCAAAGTGGGAAGAATTACCACAACTGAAGATTTCAAACACCTAGCTCG
CAAGCTGACTCACGGCGTTATGAATAAGGAGCTGAAGTACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGGATGTGA
GACACAAAACCAAGGAGTACATTAAGAAGCACATGCAGAAGTTTGGGGCTGTTTACACACCCAAACGGGACACTGAATTA
GAG

Alignment

ORF - retro_ttru_1912 Open Reading Frame is not conserved.

Retrocopy - Parental Gene Alignment summary:

• Percent Identity: 93.03 %
• Parental protein coverage: 100.0 %
• Number of stop codons detected: 1
• Number of frameshifts detected: 4

Retrocopy - Parental Gene Alignment:

Parental  MEERGKDSSKLEGESKRTSENEAMKRCYSPTNEQGFRRGSSYSKHGNSASRYKSAP-SKPAPKSDKFKNS
          MEERGKDSSKLEGESKRTSENE.MKRCYSPTNEQGFRRGSSYSKHG.SAS.YKSAP.SKPAPKSDKFKNS
Retrocopy MEERGKDSSKLEGESKRTSENETMKRCYSPTNEQGFRRGSSYSKHGKSASCYKSAP>SKPAPKSDKFKNS

Parental  FCCTELNEEIKQSHSFSLQTPCSKGSELRMISKVTEREKIGSPPSNRLNDSPTFKKLDESPVFKSEFIGH
          FCCTELNEEIKQSH.FSLQTP.SKGSELR.ISKV.EREKIGSPPSNRLNDSPTFKKLDESPVFKSEFIGH
Retrocopy FCCTELNEEIKQSHCFSLQTPRSKGSELRVISKVPEREKIGSPPSNRLNDSPTFKKLDESPVFKSEFIGH

Parental  DSHDSIKELDSLCKVKNDQLRSYCPTEFNINGSPGAESDLATFCTSKRDTVLMSSDDSVTGSEVSPLVKT
          DSHDSIKELDSLCKVKNDQLRSYCPTEFNINGSPGAESDLATFCTSKRDTVLMSSDDSVTGSEVSPLVKT
Retrocopy DSHDSIKELDSLCKVKNDQLRSYCPTEFNINGSPGAESDLATFCTSKRDTVLMSSDDSVTGSEVSPLVKT

Parental  CMLSSNGFQNINRCKEKDLDDTRMQHNKLESPFRETEPPVSPHQDQLISLPVMTIDYSKTIVKEPVDVRV
          CMLSSNGFQNINRCKEKDLDDTRMQ..K.ESPFRETEPPVSPHQDQLISLPVMTIDYSKTIVKEPVDVRV
Retrocopy CMLSSNGFQNINRCKEKDLDDTRMQNSKSESPFRETEPPVSPHQDQLISLPVMTIDYSKTIVKEPVDVRV

Parental  SCCKTKDSDIYCTSN-NRRSLYHSGAENTEPLVTKISSNSFMNVHLKSKTVICDNGSLTDQHSKFACGEY
          SCCKT.DSDIYCTSN.N..SL.HSGAENTEPLVT.ISSNSFM.VHLKSKTVICDNGSLTDQHS.FACGEY
Retrocopy SCCKTNDSDIYCTSNDNPPSLCHSGAENTEPLVTNISSNSFMDVHLKSKTVICDNGSLTDQHSEFACGEY

Parental  KQSVGSTSSASVNHFDDLYPPTGSSCIASSLQSLPAGTNVDSLTLLQCGENTSPVWDAVLKSKSSEFLKH
          KQSVGSTSSAS.NHFDDLYPPTGSSCIASSLQSLP.GTNVD.LTLLQCGENTSPV.DAVLKSKSSEFLKH
Retrocopy KQSVGSTSSASINHFDDLYPPTGSSCIASSLQSLPPGTNVDGLTLLQCGENTSPVLDAVLKSKSSEFLKH

Parental  AEKEIIEVGSGLPDSGRGFASWENRHNNGLSGKCVQETQEKGNSILPDRRGRPEISLDEEGGRGHAHTSD
          AEKEIIEV.SGLPDSGRGFASWENRHNNGLSGKCVQE.QE.GNSILPDRRGRPEISLDE.GGRG.AHTSD
Retrocopy AEKEIIEVASGLPDSGRGFASWENRHNNGLSGKCVQEAQEEGNSILPDRRGRPEISLDEDGGRGQAHTSD

Parental  DSEVVFSSCDLNLIMEDSDGVTYTLKCDSSGHASEIVSTVHEDYSGSSESSSDESDLEDTDFDDSSIPRN
          DSEVVFSSC.LNLIMEDSDGVT.TLKCDSSGHASEIVSTVHEDYSGSSESS...SD.EDTD.DDSSIPRN
Retrocopy DSEVVFSSCALNLIMEDSDGVTNTLKCDSSGHASEIVSTVHEDYSGSSESS---SDSEDTDSDDSSIPRN

Parental  CFQSVVVVPKNS-LPMEETSPSSSRSSQSYRHYSDHWDDERLEPRRHSYEEKFESIASKACPQTEKFF-H
          ..QS.VVVPKNS.LPMEETSP.SS.SSQSYRHYSDH..DERLEPR.HSYEEKFESIASKACPQTEKFF.H
Retrocopy HLQSMVVVPKNSTLPMEETSPCSSQSSQSYRHYSDHREDERLEPRMHSYEEKFESIASKACPQTEKFFFH

Parental  KATEKDSE-SLTQPIQKQIDNHLSEIAHPQ-DGVDSTSHTDIKSDPLGHPNSEEAVKARITSRQQEELPV
          KATEK.SE.S.TQPIQKQIDNH.SEIA.PQ.DGVDSTSHTDIKSDPLGHPNSEEAVKA.ITSRQQEELPV
Retrocopy KATEKNSEISFTQPIQKQIDNHMSEIAYPQSDGVDSTSHTDIKSDPLGHPNSEEAVKAKITSRQQEELPV

Parental  YSSDDFEDVSSKSRQQTTFANRPDSRLGKTESNFSSCEISRVDGFRSS-EELRNLGWDFSQQKKPTTTYQ
          YS.DD.EDVSSKSRQQTTF.NRPDSRLGKT.SNFSSCEISRVDGFRSS.EELRNLGWDFSQQ.KPTTTYQ
Retrocopy YSPDDSEDVSSKSRQQTTFPNRPDSRLGKTQSNFSSCEISRVDGFRSSSEELRNLGWDFSQQEKPTTTYQ

Parental  QPDSSYGACGGHKYQQSAEQYSGTRNSWQGNGYWDPRSAGRPPGTGVVYDRIQGQVPDSLTDDREEEEN-
          QPDSSYGACGGHKYQQSAEQYSGT.N.WQ.NGYWDPRSAGRPPGTGVVYD.IQGQVPDSLTDDREEEEN.
Retrocopy QPDSSYGACGGHKYQQSAEQYSGTCNYWQANGYWDPRSAGRPPGTGVVYDLIQGQVPDSLTDDREEEENW

Parental  DQRGGSHFSGQSNNFFLSLQKDKGSVQAPEISSNSIKDSLAVNEKKDLLKNLEKNDMKDRGPLKKRRQEL
          DQRGGS.FS.QSN.FFLSLQKDKGSVQAPEISSNSIKDSLAV.E.KDL.KNLE.ND.KDRGPLKKRRQEL
Retrocopy DQRGGSRFSDQSNKFFLSLQKDKGSVQAPEISSNSIKDSLAVSEEKDLSKNLEQNDRKDRGPLKKRRQEL

Parental  ESDSESDGELQDRKKVRVEVEQGETAVPLGSALVGPSCVMEDFRDPQRWKECAKQGKMPCYFDLIEENVY
          ESDSESDGELQDRKKVRVEVEQGETAVPLGSALVGPSCVM.DFRDP..WKECAKQGKMP.YFDLIE.NVY
Retrocopy ESDSESDGELQDRKKVRVEVEQGETAVPLGSALVGPSCVMKDFRDPEWWKECAKQGKMPSYFDLIE*NVY

Parental  LTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHAD
          LTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCL.RLLMIECSSRCPNGDYCSNRRFQRKQHAD
Retrocopy LTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLHRLLMIECSSRCPNGDYCSNRRFQRKQHAD

Parental  VEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKG
          VEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLD.KEFKARVKEYARN.N.HYYFMALKNDEIIDATQKG
Retrocopy VEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDRKEFKARVKEYARNRNSHYYFMALKNDEIIDATQKG

Parental  NCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGG
          NCSRFMNHSCEPNCE.QKWTVNGQLRVG.FTTKLVPSGSELTFDYQFQRYGKEAQ..FCGSANCRGYLGG
Retrocopy NCSRFMNHSCEPNCEAQKWTVNGQLRVGIFTTKLVPSGSELTFDYQFQRYGKEAQRRFCGSANCRGYLGG

Parental  ENRVSIRAAGGKMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRIETLEQKLTCLKLIQNT
          ENRVS.RAA.GKMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLS.L.VRIETLEQKLTCLKLIQNT
Retrocopy ENRVSLRAARGKMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSWLTVRIETLEQKLTCLKLIQNT

Parental  HSQSCLKSFLERHGLSLLWIWMAELGDGRESNQKLQEEIIKTLEHLPIPTKNMLEESKVLPIIQRWSQTK
          .SQSCLKSFLERHGL.LLWIWMAEL.DGRESNQKLQEEIIKTLEHLPIPT.NMLEESKVLPIIQRWSQTK
Retrocopy YSQSCLKSFLERHGLPLLWIWMAELRDGRESNQKLQEEIIKTLEHLPIPTENMLEESKVLPIIQRWSQTK

Parental  TAVPQLSEGDGYSSENTSRAHTPLNTPDPSTKLSIEADTDTPKKLMFRRLKIISENSMDSAISDATSELE
          TAVPQLSEGDGYSSENTSRAHTPLNTPDPSTKLSIEADTDTPKKL.FRRLKIISEN.MDSAISDATSELE
Retrocopy TAVPQLSEGDGYSSENTSRAHTPLNTPDPSTKLSIEADTDTPKKLKFRRLKIISENGMDSAISDATSELE

Parental  GKDGKEDLDQLENVPIEEEEELQSQQLLTQQLPESKVDSEIAVEAIKLPTSEPEADTEIEPK-ESNGTKL
          GKDGKEDLDQLENVPIEEEE.....QL.TQQLPESKVDS.IAVEAIKLPTSEPEADTEIEPK.ESNGTKL
Retrocopy GKDGKEDLDQLENVPIEEEEQ----QLRTQQLPESKVDSDIAVEAIKLPTSEPEADTEIEPK<ESNGTKL

Parental  DEPIAEETPSQDEEEGVSDVESERSQ-EQPDKTVDISDLATKLLDSWKDLKEVYRIPKKSQTEKESTITE
          DEPIAEETPSQDEEEGVSDVESERSQ.EQP.KTVDISDLATKLLDSWKDLKEVYRIPKK.QTEKESTITE
Retrocopy DEPIAEETPSQDEEEGVSDVESERSQ<EQPHKTVDISDLATKLLDSWKDLKEVYRIPKKRQTEKESTITE

Parental  RGRDAVGFRDQTVAPKTPNRSRERDPDKQTQNKEKRKRRGSLSPPSSAYERGTKRPDDRYDTPTSKKKVR
          RGRDA.GFRDQTVAPKTPNRSRERDPDKQTQNKEKRKRRGSLSPP.SAYERGTKRP..RYDTPTSKKKVR
Retrocopy RGRDALGFRDQTVAPKTPNRSRERDPDKQTQNKEKRKRRGSLSPPPSAYERGTKRPGGRYDTPTSKKKVR

Parental  IKDHNQLSTEERRKLFEQEVAQWEAQKKQQQMQNLGMTSPLPYDSLGYHAPCHPFAGYPPGYPMQAYVDP
          I.D.NQLSTEERRKLFEQEVAQ.EAQK.QQQMQNL.MTSPLP.D.LGYHAP.HPFAGYPPGYPMQAYVDP
Retrocopy IQDRNQLSTEERRKLFEQEVAQREAQKQQQQMQNLRMTSPLPCDTLGYHAPHHPFAGYPPGYPMQAYVDP

Parental  SNPNAGK-LLPTPSMDPVCSPSPYDYSQPLVGHSTEPLAAPPPVPVVPHVAAPVEVSSSQYVAQSDGVVH
          SN.NAGK.LLPTPSMDPVCSPSPYD.SQPLVGHSTEPLAAPPPVP.VPHVAAPVEVSSSQYVAQSDGVVH
Retrocopy SNLNAGKVLLPTPSMDPVCSPSPYDHSQPLVGHSTEPLAAPPPVPMVPHVAAPVEVSSSQYVAQSDGVVH

Parental  QDSSVTVLPVPAPGPVQGQNYGVWDSNQQSVSVQQQYSPAQSQATIYYQRQAGPTVYGMTSPYSQTTPPI
          QDS.VTVLP.PAPGPVQGQNYGVWDSNQQSVSVQQQYSPAQSQAT.Y.Q.QA.PTV.G.TSPYSQTTPP.
Retrocopy QDSRVTVLPLPAPGPVQGQNYGVWDSNQQSVSVQQQYSPAQSQATLYHQGQAAPTVCGVTSPYSQTTPPT

Parental  VQSYA-QPSLQYIQGQQIFTAHPQGVVVQPATAVTTIVAPGQPQPLQPPEMVVTNNLLDLPPPSPPKPKT
          VQSYA.QPSLQYIQGQQI.TAHPQGVVVQPATAVTTIVAPGQPQP.QPPEMVVTNNLLDLPPPSP.KPKT
Retrocopy VQSYA<QPSLQYIQGQQILTAHPQGVVVQPATAVTTIVAPGQPQPFQPPEMVVTNNLLDLPPPSPHKPKT

Parental  IVLPPNWKTARDPEGKIYYYHVITRQTQWDPPTWESPGDDASLEHEAEMDLGTPTYDENPMKTSKKPKTA
          .VLPPNWKTARDPEGKIYY.HVITRQTQWDPPTWESPGDDASLEHEAEMDLGTPTYDENPMKTSKKPKTA
Retrocopy TVLPPNWKTARDPEGKIYYSHVITRQTQWDPPTWESPGDDASLEHEAEMDLGTPTYDENPMKTSKKPKTA

Parental  EADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVGRITTTEDFKHLARKLTHGVMNKELKYCKNPE
          EAD.SSELAKKSK.VFRKEMSQFIVQCLNPY.KPDCKVGRITTTEDFKHLARKLTHGVMNKELKYCKNPE
Retrocopy EADASSELAKKSKQVFRKEMSQFIVQCLNPYWKPDCKVGRITTTEDFKHLARKLTHGVMNKELKYCKNPE

Parental  DLECNENVKHKTKEYIKKYMQKFGAVYKPKEDTELE
          DLECNE.V.HKTKEYIKK.MQKFGAVY.PK.DTELE
Retrocopy DLECNEDVRHKTKEYIKKHMQKFGAVYTPKRDTELE

Legend:

• *: Stop codon
• >: Forward frameshift by one nucleotide
• <: Reverse frameshift by one nucleotide

Expression

RNA-Seq

Tursiops truncatus was not studied using RNA-Seq expression data.

ChIP-Seq

Tursiops truncatus was not studied using ChIP-Seq data.

EST

No EST(s) were mapped for retro_ttru_1912 retrocopy.

TSS

Tursiops truncatus was not studied using FANTOM5 data.

Lab

retro_ttru_1912 was not experimentally validated.

Homology

Retrocopy orthology:

Tursiops truncatus does not belong to any of the species groups (eutheria, teleost or neognath), studied for retrocopy-based homology. For more information about studied groups, please go to help section.

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Parental genes homology:

Parental genes homology involve 1 parental gene, and 1 retrocopy.

Species	Parental gene accession	Retrocopies number
Tursiops truncatus	ENSTTRG00000015870	1 retrocopy	retro_ttru_1912 ,