Parental gene:

PP1S70_177V6

Aliases:None
Description:Predicted protein [Source:UniProtKB/TrEMBL;Acc:A9SEG2]
Organism:Moss (Physcomitrella patens)
Coordinates:DS544959.1:1007006..1010872(-)


>PP1S70_177V6
ATGATGATGATGATGCGTACTCTTCCAGGCGTGACTTCCTCTGCCATCGAGCACGTGTCTTGTCAGAGCAACCCCTCCAG
CCCAACGATCGCTCGAGCCCAATATGGACTCCCACGCTCCCAGGCTTCCAGGCTGCATGCTGTGTCAAACAGCACCTCGC
TGAAGATAACGCTGACCTGCAACAAGCTGAGCTTCAATCCGTTCCTGGCTGGTGAGTTGCTTGGGTTGAGCTCCTGTGTG
AAAATTGGTCCAGCCGTGAGGAGGGCCCCAGTTCACAAAATCTGTGCACAAGCTGCGGATGCCAGTGCCTCTGATGCATA
CCCGGAAGGATCAGTCAAGGCTGGCGATGTGGAGGTTCCGAAGCCCGCAATGGGGAGAGTGAAAATTGGTATCTACTTCG
CGACTTGGTGGGCATTGAATGTGGTGTTCAACATCTACAACAAGAAGGTGCTGAACGCGTATCCGTTCCCGTGGTTGACA
TCCACGCTGTCCCTTGCCGCGGGTTCAGCGATCATGCTGATTTCATGGGCCCTGCGGATCGTGCCGGCACCAGACGTAGA
CGCGGAGTTCTGGAAGGGACTTTTTCCGGTGGCATTGGCGCACACGATTGGACACGTGGCAGCGACTGTGAGTATGTCCA
AGGTCGCAGTATCCTTCACGCACATCATCAAGAGCGCAGAACCCGCGTTCAGCGTGGTGATCCAGAGATTGTTCCTGGGG
GAGAACTTTCCGTTGCCTGTATACTTGTCTTTGCTGCCCATTGTTGGCGGTTGTGGTTTGGCTGCTGCTACAGAACTGAA
CTTCAACATGACAGGATTTGTGGGGGCCATGGTTTCGAATATTGCGTTTGTGTTCCGCAACATCTTCTCGAAAAAGGGAA
TGACAACGGGCAAGAGTGTTGGTGGGATGAACTACTACGCATGCCTGAGCATGATGTCGCTTGTGCTGTTGACGCCTTTC
GCAGTTGCCGTGGAAGGCCCGAAGGCTTGGATGGCGGGATGGGATGTTGCGAATGCGACTGTTGGGCCACAGATTTTCTG
GTGGGTGGTGGCGCAGAGTGTATTCTACCACTTGTACAACCAGGTGTCATACATGTCGCTGAACGAGATTTCGCCACTGA
CCTTCAGCATTGGCAACACCATGAAGCGTGTGACGGTGATTGTGTCGTCCATCATCATTTTCCACACACAAGTGCGACCA
GTGAACGCCGTTGGTGCTGCCATTGCCATCCTCGGAACATTTTTGTACTCGCAGGCCAAGCAATAA

Species Parental gene accession Homology type Retrogenes number
Amborella trichopoda AMTR_s00062p00036220 ortholog_one2many 1 retrogene
retro_atri_14,
Brassica oleracea Bo9g118840 ortholog_many2many 1 retrogene
retro_bole_30,
Musa acuminata GSMUA_Achr7G03380_001 ortholog_many2many 1 retrogene
retro_macu_2,
Medicago truncatula MTR_2g022700 ortholog_many2many 1 retrogene
retro_mtru_13,
Solanum tuberosum PGSC0003DMG400025495 ortholog_many2many 1 retrogene
retro_stub_39,
Populus trichocarpa POPTR_0001s44610 ortholog_many2many 1 retrogene
retro_ptri_19,
Prunus persica PRUPE_ppa006608mg ortholog_many2many 1 retrogene
retro_pper_3,
Arabidopsis lyrata scaffold_802017.1 ortholog_many2many 1 retrogene
retro_alyr_24,
Solanum lycopersicum Solyc07g064270.2 ortholog_many2many 1 retrogene
retro_slyc_32,
Theobroma cacao TCM_030978 ortholog_many2many 1 retrogene
retro_tcac_18,
Vitis vinifera VIT_10s0116g00760 ortholog_many2many 1 retrogene
retro_vvin_26,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ppat_10 71.54 60.10
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all PP1S70_177V6 retrocopies