Parental gene:

OPUNC12G04770

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:12:4368509..4371014(+)


>OPUNC12G04770
ATGGCGTCGGGGCAGAAGACGAGGCAGGTGGTGAAGCCAATGGAGGTGTCGGTGGAGGCCGGGAACGCCGGGGAGGCGGC
GTGGCTGGACGACGACGGGCGGCCGCGGCGGACGGGCACGTTCTGGACGGCGAGCGCGCACATCATCACCGCCGTCATCG
GCTCCGGCGTGCTGTCGCTGGCATGGGCCATCGCGCAGCTCGGCTGGGTCGCCGGCCCCGCCGTGATGCTCCTCTTCGCC
TTCGTCATCTACTACACCTCCACCCTCCTCGCCGAGTGCTACCGCACCGGCGACCCAACCACCGGCAAGCGCAACTACAC
CTACATGGACGCCGTGCGGGCCAACCTCGGCGGCGCCAAGGTCACCTTCTGCGGCGTCATCCAGTACGCCAACCTCGTCG
GCGTCGCCATCGGTTACACCATCGCGTCGTCCATCAGCATGCGCGCCATCAGGAGGGCCGGCTGCTTCCACCACAACGGC
CATGGCGACCCGTGCCGGAGCTCCAGCAACCCTTACATGATCCTCTTCGGCGTCGTGCAGATCGTCTTCTCGCAGATCCC
TGACTTCGACCAGATTTGGTGGCTGTCCATCGTCGCCGCCGTCATGTCCTTCACCTACTCCGGCATCGGCCTCTCCCTCG
GCATCGTCCAGACAATCTCCAATGGCGGGATCCAGGGCAGCCTCACCGGCATCAGCATCGGCGTCGGCGTCAGCTCGACG
CAGAAAGTGTGGCGCAGCCTGCAGGCATTCGGCGACATCGCCTTCGCGTACTCCTTCTCCAACATCCTCATCGAGATCCA
AGACACGATCAAGGCACCGCCGCCGTCGGAGGCGAAGGTGATGAAGAACGCGACGAGGCTGAGCGTGGCGACGACGACGG
TGTTCTACATGCTGTGCGGGTGCATGGGCTACGCGGCGTTCGGCGACGCGGCGCCGGACAACCTCCTCACGGGCTTCGGA
TTCTACGAGCCCTTCTGGCTGCTCGACGTCGCCAACGTCGCCATCGTCGTGCACCTCGTCGGCGCCTACCAGGTGTTCGT
CCAGCCCATCTTCGCCTTCGTCGAGCGCTGGGCGTCCCGCCGGTGGCCGGACAGCGCGTTCATCGCCAAGGAGCTCAGCG
TGGGGCCCTTCGCGCTCAGCCTCTTCCGGCTGACATGGCGGTCGGCGTTCGTCTGCCTCACCACCGTCGTCGCCATGCTC
CTCCCCTTCTTCGGCAACGTGGTGGGTCTCCTCGGCGCCGTCTCCTTCTGGCCGCTCACCGTCTACTTCCCCGTCGAGAT
GTACATCGCGCAGCGCGGCGTGCCACGTGGCAGCGCGAGGTGGATCTCACTCAAGACGCTCAGCGCGTGCTGCCTCGTCG
TCTCCATCGCCGCAGCCGCGGGCTCCATTGCTGACGTCATCGACGCGCTCAAGGTGTACCGGCCGTTCAGCGGATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA037101 ortholog_many2many 1 retrogene
retro_oind_7,
Oryza brachyantha OB12G14670 ortholog_many2many 1 retrogene
retro_obra_17,
Oryza glumaepatula OGLUM12G05640 ortholog_many2many 1 retrogene
retro_oglu_3,
Oryza nivara ONIVA12G04480 ortholog_many2many 1 retrogene
retro_oniv_32,
Triticum aestivum Traes_5DL_BB10A3B4B ortholog_one2many 2 retrogenes
retro_taes_215, retro_taes_217,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_43 71.79 97.91
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Download FASTA sequences of all OPUNC12G04770 retrocopies