Parental gene:

OPUNC04G04310

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:4:8356911..8358027(-)


>OPUNC04G04310
ATGTCGAAGGAGGTGAGCGAGGAGCCGGAGCACGCGCGGCCCAAGGACTACACCGACCCGCCGCCGGCGCCACTGTTCGA
CGTTGGTGAGCTCCGGCTGTGGTCCTTCTACCGGGCACTCATTGCTGAGTTCATCGCCACTCTCCTGTTCCTGTACATCA
CCGTCGCCACCGTCATCGGGTACAAGGTGCAGTCGTCCGCCGACCAGTGCGGCGGTGTTGGCACCCTCGGCATCGCCTGG
GCATTCGGTGGCATGATCTTTATCCTCGTCTACTGCACCGCCGGCATCTCCGGAGGGCACATTAACCCGGCGGTGACGTT
CGGGCTGCTGCTGGCGAGGAAGGTGTCGGTGATTCGCGCGGTGATGTACATCGTGGCGCAGTGCCTGGGCGGCATCGCGG
GCGTGGGCATCGTGAAGGGCATCATGAAGCACCAGTACAACGCCAACGGCGGCGGCGCCAACATGGTGGCCAGCGGCTAC
TCCACCGGCACCGCCCTCGGCGCCGAGATCATTGGCACCTTCGTCCTCGTCTACACCGTTTTCTCCGCCACCGACCCAAA
GCGCAACGCCCGCGACTCCCACGTCCCAGTGCTCGCGCCGCTGCCCATCGGGTTCGCCGTGTTCATGGTGCACCTGGCCA
CCATCCCCATCACCGGCACGGGCATCAACCCTGCCCGGAGCATCGGCGCCGCCGTCATCTACAACCAGAAGAAGGCATGG
GACGACCACTGGATCTTCTGGGCGGGGCCGTTCATCGGAGCGCTGGCGGCGGCGGCGTACCACCAATACATCCTCCGGGC
GGCGGCCATCAAGGCGCTAGGCTCCTTCCGGAGCAACCCCAGCAACTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA009362 ortholog_one2many 1 retrogene
retro_oind_43,
Oryza longistaminata KN540828.1_FG001 ortholog_one2one 1 retrogene
retro_olon_7,
Leersia perrieri LPERR04G03430 ortholog_one2one 1 retrogene
retro_lper_22,
Oryza brachyantha OB0038G10090 ortholog_one2many 1 retrogene
retro_obra_3,
Oryza barthii OBART04G05050 ortholog_one2one 1 retrogene
retro_obar_18,
Oryza glumaepatula OGLUM04G04240 ortholog_one2one 1 retrogene
retro_oglu_29,
Oryza meridionalis OMERI04G05010 ortholog_one2one 1 retrogene
retro_omer_6,
Oryza nivara ONIVA04G03300 ortholog_one2one 1 retrogene
retro_oniv_20,
Oryza rufipogon ORUFI04G05780 ortholog_one2one 1 retrogene
retro_oruf_16,
Oryza sativa japonica OS04G0233400 ortholog_one2one 1 retrogene
retro_osat_19,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_34 69.33 79.43
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Download FASTA sequences of all OPUNC04G04310 retrocopies