Parental gene:

OPUNC01G35260

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:1:38407732..38409139(+)


>OPUNC01G35260
ATGGAGCCTCCTCAACTCGACGGCCAGTGCGGGGGCGAGCCACCAGCATCCGTGGAGGAAGTCGCGTTCATGCCGTACGC
CACCGCGGACTCCTCGCTGCGCGCCATGGCCGGTCAGGCCGAGGGCTTCGGCCGCCACGCCATCGGCGGCCTCCACGGCG
ACGTCTACCACGTCACGACCCTGGAGGACGACGGGGACGGGTCGCTCCGGGAGGGTTGCCGGAGGCGCGAGCCGCTGTGG
ATCGTCTTCGACGTGTCTGGCACCATCCACCTCTCGACGGGACTACGCGTGTCGTCGTACAAGACCATCGACGGGCGCGG
GCAGCGGGTGGTGCTTTCCGGCAAGGGGCTCCAGCTGCGGGAGTGCGAGCACGTGATCGTCTGCAACCTCGAGGTGGAGG
GGTGCCGCGGTCGCGACGCCGACGCCGTGGCGGTGAAGCCCGGGTCGAGGCACGTTTGGATCGACCGGTGCGGCCTTCGC
GGCTGCGGCGACGGCCTCGTCGACGTCACCAGGGGAAGCACGGACGTGACCGTGTCCAGGTGCCGCTTCTCTGCGCACGA
CAAAGCCGTGCTGATCGGCGGCAGCGCCGGCCACGTCGAGGACCGCGCCATCCGGGTGACCATCCACCACTGCCTCTTCG
ACGGCACGCGGCAGAGGCACCCGCGCGTCCGCTTCGGCAGGGTGCACCTCTACAACAACTACACCAGGGGCTGGGGCATT
TACGCTGTCTGTGCCAGCGTCGAGTCACAGATTGTATCCCAGTGCAACATTTACGAGGCAGGGGAGAAGAAGAAAGTCTT
CAAGTACATGACAGAACAGGCGGCAGACAGAGACCGGAGTTCAACCGGGCTCATCCGTTCTGAAGGCGACCTGTTCCTGA
ACGGTGCAGAGTGCACTGCTCATGATTCAGAATGTGCGGCAGATGAGCTGTGGGACTTCAAGGTCCAGGATTTGGATTTC
TACCAGTCTTGTTCGGTCCAACCAGCGTCAATGGCGCTCAAGGAGCTACTGGTGTGCTTCACCGGCTGGCAGCCAGTTCC
GCTGCCGGAAGACATTTGTCTCGAAGAGAAAACTGATTCTGCTCCTGCTGACACTACCGCTTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA004758 ortholog_one2one 1 retrogene
retro_oind_37,
Leersia perrieri LPERR01G31380 ortholog_one2one 1 retrogene
retro_lper_4,
Oryza meridionalis OMERI01G33590 ortholog_one2one 1 retrogene
retro_omer_1,
Oryza nivara ONIVA01G41460 ortholog_one2one 1 retrogene
retro_oniv_25,
Oryza punctata OPUNC06G17690 within_species_paralog 1 retrogene
retro_opun_11,
Oryza glaberrima ORGLA01G0303100 ortholog_one2one 1 retrogene
retro_ogla_4,
Oryza sativa japonica OS01G0837100 ortholog_one2one 1 retrogene
retro_osat_37,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_9 73.99 74.39
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Download FASTA sequences of all OPUNC01G35260 retrocopies