Parental gene: | OPUNC01G20010 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 1:23110257..23114469(+) |
>OPUNC01G20010
ATGGCGCGCGCTCGCCTCCGCCTCCGCCTCCTCCTGCCCCCGCTCGCGGCGCTGCTCCTCTTCGCGCACCTCGCCGTCGC
GGTGGCGCGGCTGCGGATGGAGCCGTGGGGGGAGGAGGAGGCCAACCTCCGCCTGCCGTCGGAGCGCGGCGTGGCGGATG
ACGCAGCGGCGGAGGACGACGCCGCCGAGGCCGCCGAAGGCACCAGGTGGGCCGTCCTCATCGCCGGTTCCAACGGCTAC
TACAACTACCGCCACCAGGCGGATGTCTGCCATGCCTATCAGATCATGAAGAGGGGCGGGCTCAAGGACGAGAATATCAT
CGTCTTCATGTACGACGACATCGCGCACAACCCGGAGAATCCGAGGCCTGGTGTCATCATCAACCATCCCCAGGGTGGCG
ATGTCTATGCTGGGGTCCCGAAGGATTACACTGGGAAGGAGGTTAATGTCAAGAACTTGTTTGCTGTTCTGCTCGGTAAC
AAAACTGCTGTCAAAGGTGGGAGTGGCAAAGTCCTGGACAGTGGCCCCAACGATCATATTTTCATTTTTTACAGTGACCA
TGGGGGTCCTGGTGTCCTGGGGATGCCAACCTATCCATACCTCTATGGTGATGATCTTGTAGACGTTCTGAAGAAGAAGC
ATGCTGCTGGGACGTACAAAAGCCTGGTCTTTTACCTTGAAGCCTGTGAATCTGGAAGCATCTTTGAGGGTCTATTGCCA
AATGACATCAATGTTTATGCCACCACCGCATCAAACGCTGATGAGAGCAGCTGGGGGACATACTGCCCCGGGGAGTACCC
AAGCCCACCTCCGGAGTACGACACATGCCTGGGGGACTTGTACAGCGTTGCTTGGATGGAAGACAGCGATGTCCACAACC
TGAGAACTGAATCACTCAAGCAGCAGTACAATCTCGTCAAGGAAAGGACATCTGTGCAGCACACATATTACTCTGGGTCA
CATGTGATGGAATACGGTTCTTTAGAACTGAATGCCCATCATGTGTTCATGTACATGGGTTCCAATCCGGCTAACGACAA
TGCTACATTTGTGGAAGATAACTCGTTGCCATCGTTCTCAAGGTCTGTTAATCAGCGGGATGCTGACCTGGTTTACTTCT
GGCAGAAGTACCGCAAATTGGCTGAGAGTTCTCCTGAGAAAAACGAAGCTCGGAAGCAATTGCTTGAAATGATGACACAT
AGATCTCATGTTGACAACAGTGTTGAGCTGATCGGAAACCTTCTCTTTGGCTCTGAGGAAGGTCCAAGGGTTCTAAAGGC
TGTTCGTGCAACTGGCGAACCTCTTGTTGATGACTGGAGCTGTCTCAAGTCTATGACGTTGGTATGGGATATTCTATCTT
GTAACAGCTTACCTAATATGCGTCTGCATTTTCTTCAGGTACGCACTTTTGAAGCACAATGCGGCTCACTAGCGCAGTAT
GGGATGAAGCACATGAGATCCTTTGCAAACATCTGCAATGCCGACATCTCTGCTGAAGCGATGGCAAAGGTTGCTACGCA
GGCCTGCACCAGCATTCCTTCCAACCCCTGGAGCTCCACCCATAGGGGGTTTAGTGCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Zea mays | GRMZM2G093032 | ortholog_one2many | 1 retrogene | |
| Oryza longistaminata | KN538817.1_FG009 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB01G29280 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G19640 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G23260 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G18100 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0161200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0559600 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_12 | 59.85 | 73.00 | Please wait, loading  |
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Download FASTA sequences of all OPUNC01G20010 retrocopies