Parental gene:

ONIVA02G02120

Aliases:None
Description:None
Organism:Indian wild rice (Oryza nivara)
Coordinates:2:1227482..1232549(-)


>ONIVA02G02120
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCGACC
GCCGCGCTCTGCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTC
CAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGATTAA
CATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAAC
CAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAAACT
TGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACT
TTGACATTCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
CTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCTAGC
AATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGG
ATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTATGCA
TGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAA
CACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAATCT
GGCGTGTTCATGATGATTGCTCATTCACTGGTGAAGTCATAGGATCACAGCAGACCAAGGCATGA

Species Parental gene accession Homology type Retrogenes number
Leersia perrieri LPERR02G02000 ortholog_one2one 1 retrogene
retro_lper_21,
Oryza brachyantha OB02G12100 ortholog_one2one 1 retrogene
retro_obra_24,
Oryza barthii OBART02G02200 ortholog_one2one 1 retrogene
retro_obar_2,
Oryza glumaepatula OGLUM02G02060 ortholog_one2one 1 retrogene
retro_oglu_34,
Oryza punctata OPUNC02G01640 ortholog_one2one 1 retrogene
retro_opun_20,
Oryza rufipogon ORUFI02G02210 ortholog_one2one 1 retrogene
retro_oruf_33,
Oryza sativa japonica OS02G0127700 ortholog_one2one 1 retrogene
retro_osat_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oniv_9 84.42 78.96
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Download FASTA sequences of all ONIVA02G02120 retrocopies