Parental gene:

OBART05G00890

Aliases:None
Description:None
Organism:Oryza barthii
Coordinates:5:560797..563135(-)


>OBART05G00890
ATGGGTCACGGTGTCAGCTGCGCCCGCACCGGCGACGAGCACGACTTCTTCCGGGCGGCGCAGCTCGGCGACCTCGACGC
CCTGGCCGCCCTCCTCGCCGCCGACCCTTCCCTCGCCCGCCGCGCCACCCTCTACGACCGCCTCTCCGTCCTCCACATCG
CCGCCGCCAATGGCCGCATCGAGGTCGCTCACCTCACTGCTTCTTCTTCTTCTTCTTCCCTCGGTCTCCGGGACTTGCTT
GTGCTCTCCATGTTCTTGGATCGCGGGGCGCCGCCGGACGCGGTGAATCGGCACAAGCAGACGCCGCTGATGCTCGCGGC
CATGCACGGCAAGATCGACTGCGTGCTCAAACTCCTCCAGGCCGACGCAAATATCTTGATGTTCGACTCGGTGCACGCGA
GGACCTGCCTCCACCACGCGGCGTACTACGGCCACGTCGACTGCCTGCAGGCCATCCTCGCCGCCGCGCAGACCACGCCG
GTGGCCGACTCATGGGGTTTCGCCCGGTTCGTCAACGTCAGGGACGACCACGGCGCCACGCCGCTGCATCTCGCGGCCAG
GCAGGGGCGGCCGGGGTGCGTGCAGGTGTTGCTGGAGAACGGCGCCATTGTGTCGGCTTTGACAGGATCATATGGCTTCC
CTGGAAGCACGTCGCTTCATTTGGCTGCTCGTAGCGGGAACTTGGATTGCATCAGGAAGCTGCTTGCCTGGGGAGCTGAT
CGGCTCCAAAGGGATTCGGCTGGGAGAATTCCCTATTCTGTTGCGCTGAAACGGAACCATGGAGCATGTGCAGCTTTGCT
GAACCCTACATCAGCAGAGCCCATGGTGTGGCCATCCCCACTTAAGTTCATCAGTGAGCTTGAACCAGAAGCTAAGGCTC
TCCTGGAAGCAGCTCTGATGGAAGCCAACAGGGAGAGGGAGAAGAAAATCCTGAATGGCACAAAGTACTCCCTGCCATCC
CCTTCGCCCGGTGATGACAGTGCCGATGACGATGCATGCTCAGAGGTGAGCGACACGGAGCTCTGCTGCATCTGCTTCGA
CCAGGCTTGCACCATTGAGGTGCAAGACTGTGGACATCAAATGTGTGCACCGTGCACGCTGGCACTGTGCTGTCACAACA
AACCCAATCCGACGACCCTGACACCGCCCTCACCGGCCTGCCCATTCTGCCGGGGCAGCATCTCACGGCTGGTGGTGGCC
CAAACAAGGTCTGCTTGTGATCCTGACAAGCCGTCATCCCCGCAGCTCACCCGGAAGCGGTCGCGTCGATCTCACAACCT
CAGTGAGGGCAGCAGCAGCTTCAAAGGTCTATCTTCGGCCATGGGCTCCTTCTCAAAGCTTGGCCGTGGCTCGAGCCGCA
TGGCGGACAGTGACAGCAGCAACCTGGACAAGCCTGAGCACGATCTATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA018946 ortholog_one2one 1 retrogene
retro_oind_45,
Leersia perrieri LPERR05G00860 ortholog_one2one 1 retrogene
retro_lper_10,
Oryza glumaepatula OGLUM05G00910 ortholog_one2one 1 retrogene
retro_oglu_21,
Oryza meridionalis OMERI05G00950 ortholog_one2one 1 retrogene
retro_omer_12,
Oryza nivara ONIVA05G00830 ortholog_one2one 1 retrogene
retro_oniv_6,
Oryza punctata OPUNC05G00800 ortholog_one2one 1 retrogene
retro_opun_25,
Oryza glaberrima ORGLA05G0009300 ortholog_one2one 1 retrogene
retro_ogla_12,
Oryza rufipogon ORUFI05G00870 ortholog_one2one 1 retrogene
retro_oruf_36,
Oryza sativa japonica OS05G0112000 ortholog_one2one 1 retrogene
retro_osat_41,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_obar_26 67.44 54.58
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Download FASTA sequences of all OBART05G00890 retrocopies