Parental gene:

FDFT1, ENSVPAG00000006183

Aliases:None
Description:farnesyl-diphosphate farnesyltransferase 1 [Source:HGNC Symbol;Acc:3629]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_354:145091..184783(+)


>ENSVPAG00000006183
ATGGAGTTCGTGAAGTGCTTGGGGCACCCGGAGGAGTTCTACAACCTGCTGCGCTTCCAGATGGGGGGCCGGCAGAAGGT
GATACCCAAGATGGACCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCCCTGGAGTTCAGAA
ATCTGGCTGAGAAATATCAAACGGTGATTGTTGACATTTGCCGGAAGATGGGATGTGGGATGGCGGAGTTTTTGGATAAG
CAAGTGACGTCTGCGCAGGAGTGGGACAAGTACTGTCACTACGTGGCTGGGCTGGTGGGGATTGGCCTTTCCCGTCTATT
CTCGGCCTCAGAGTTTGAAGACCCCTTAGTTGGTGAAGACACAGAGCGCGCCAACTCCATGGGCCTGTTCCTGCAGAAAA
CAAACATCATTCGTGATTATCTCGAAGACCAGCGAGAAGGAAGGGAGTTTTGGCCTCAAGAGGTTTGGGGCAAGTACGTG
AAGAAGCTGGGCGACTTTGCTAAGCCAGAGAACGTTGATGTGGCCGTGCAGTGCCTGAACGAGCTGATAACCAACACACT
GCACCACATCCCCGATGTCATCACCTACCTCTCACGGCTGAGAAACCAGAGTGTTTTTAACTTCTGCGCTATTCCGCAGG
TCATGGCCATTGCTACTTTGGCCGCCTGTTACAATAATCAGCAGGTGTTCAGAGGGGTGGTGAAGATTCGGAAAGGGCAA
GCAGTCACCCTGATGATGGATGCCACCAACATGCCAGCCGTCAAAGCTATAATACACCAGTACATGGAGGAGATTTATCA
GAGAATCCCTGACTCCGACCAATGTTCTGGTAAAACAAGGCAGATCATCTCCACGATCAGGACACAGAATCTTCCCAATT
GCCAGCTCATCTCCCGGAGCCACTACTCCCCCATCTACCTGTCATTTGTCATGCTCCTGGCGGCCCTGAGCTGGCAGTAC
CTGAGTGCCCTGTCCCAGGTCACAGAGGACTACGTTCAGACCGGCGAGCACTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003988 ortholog_one2one 2 retrogenes
retro_cjac_1945, retro_cjac_2761,
Erinaceus europaeus ENSEEUG00000013655 ortholog_one2one 1 retrogene
retro_eeur_97,
Loxodonta africana ENSLAFG00000007372 ortholog_one2one 1 retrogene
retro_lafr_772,
Mus musculus ENSMUSG00000021273 ortholog_one2one 1 retrogene
retro_mmus_1182,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_463 82.53 53.48
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Download FASTA sequences of all ENSVPAG00000006183 retrocopies