Parental gene:

ENSVPAG00000000406

Aliases:None
Description:None
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_3368:2913..10752(+)


>ENSVPAG00000000406
ATGGACACCGGTGTGATTGAAGGTGGATTAAATGTCACTCTCACCATCCGGCTACTTATGCATGGAAAGGAAGTTGGCAG
TATCATCGGAAAGAAAGGAGAATCAGTTAAGAAGATGCGCGAGGAGAGTGGTGCACGTATCAACATCTCAGAAGGGAATT
GTCCTGAGAGAATTATCACTTTGGCTGGACCCACTAATGCCATCTTCAAAGCCTTTGCTATGATCATTGACAAACTGGAA
GAGGACATCAGCAGCTCTATGACCAATAGCACAGCTGCCAGTAGACCCCCAGTCACCCTGAGGCTGGTGGTCCCTGCTAG
TCAGTGTGGCTCTCTCATTGGGAAAGGTGGTTGCAAGATCAAGGAAATACGAGAGAGTACAGGGGCTCAGGTCCAGGTGG
CAGGGGATATGCTCCCCAACTCAACTGAGCGGGCCATCACTATTGCTGGCATTCCGCAATCCATCATTGAGTGTGTGAAA
CAGATCTGCGTGGTCATGTTGGAGACTCTCTCCCAGTCCCCCCCGAAGGGCGTGACCATCCCGTACCGGCCCAAGCCGTC
CAGTTCTCCGGTCATCTTTGCAGGTGGTCAGGACAGGTACAGCACAAGCGACAGTGCGAGCTTTCCCCACACCTCGTCCA
TGTGCCCTGAC

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020757 possible_ortholog 1 retrogene
retro_btau_175,
Canis familiaris ENSCAFG00000006821 possible_ortholog 1 retrogene
retro_cfam_54,
Callithrix jacchus ENSCJAG00000018590 possible_ortholog 2 retrogenes
retro_cjac_3253, retro_cjac_754,
Cavia porcellus ENSCPOG00000000967 possible_ortholog 2 retrogenes
retro_cpor_193, retro_cpor_97,
Equus caballus ENSECAG00000022389 possible_ortholog 1 retrogene
retro_ecab_67,
Homo sapiens ENSG00000197111 possible_ortholog 2 retrogenes
retro_hsap_4077, retro_hsap_83,
Gorilla gorilla ENSGGOG00000012613 possible_ortholog 2 retrogenes
retro_ggor_212, retro_ggor_2734,
Microcebus murinus ENSMICG00000011651 possible_ortholog 2 retrogenes
retro_mmur_1226, retro_mmur_1228,
Myotis lucifugus ENSMLUG00000009971 possible_ortholog 3 retrogenes
retro_mluc_2199, retro_mluc_314, retro_mluc_571,
Macaca mulatta ENSMMUG00000006608 possible_ortholog 2 retrogenes
retro_mmul_1263, retro_mmul_1994,
Mus musculus ENSMUSG00000056851 possible_ortholog 1 retrogene
retro_mmus_274,
Nomascus leucogenys ENSNLEG00000017693 possible_ortholog 1 retrogene
retro_nleu_10,
Oryctolagus cuniculus ENSOCUG00000022490 ortholog_one2many 3 retrogenes
retro_ocun_10, retro_ocun_1622, retro_ocun_898,
Pongo abelii ENSPPYG00000004581 possible_ortholog 2 retrogenes
retro_pabe_3346, retro_pabe_92,
Pan troglodytes ENSPTRG00000005018 possible_ortholog 1 retrogene
retro_ptro_113,
Rattus norvegicus ENSRNOG00000036852 possible_ortholog 2 retrogenes
retro_rnor_1238, retro_rnor_2088,
Sus scrofa ENSSSCG00000000274 possible_ortholog 1 retrogene
retro_sscr_61,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_471 86.60 88.94
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Download FASTA sequences of all ENSVPAG00000000406 retrocopies