Parental gene:

HDHD1, ENSTSYG00000013238

Aliases:None
Description:haloacid dehalogenase-like hydrolase domain containing 1 [Source:HGNC Symbol;Acc:16818]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_3267:30200..108834(-)


>ENSTSYG00000013238
ATGGCAGCGCCCCCGTCCGTGCCCCCGCCGCGGCCAGCCACCCACCTCATCTTTGACATGGACGGCCTTCTTCTGGATAC
TGAACGCCTGTATTCAGTGGTGTTTCAAGAAATATGTGATCGCTATGAAAAGAAATACACCTGGGAGGTAAAGTCCCTGG
TTATGGGTAAAAAGGCATTAGAAGCGGCGCAGATTATAATAGACGTCCTGCAGCTCCCGATGTCCAAAGAGGAGCTGGTG
GAAGAAAGCCAGATGAAGTTAAAGGAAGTGTTCCCCACGGCTGCTCTCATGCCAGTGTTGAAAAGACTCATCCACCACCT
GCAGAAACACAACATACCCTTTGCTGTTGCCACCAGCTCAGGGTCTGTGTCATTCGAAATGAAGACAAGTAGACACAAAG
AATTCTTCAGTTTGTTTTATCACATCGTCTTGGGAGATGACCCTGAAGTAAAGAATGGCAAGCCAGACCCTGACATATTT
CTCGCCTGTGCCAAGAGATTCTCTCCTCCTCCTCCCATGGACAAGTGCCTTGTCTTTGAAGATGCTCCCAATGGGGTAGA
GGCGGCCTTGGCCGCTGGGATGCAGGTGGTCATGGTTCCAGATGGAAACTTGAGCCCGGACCTGACGAGAAAGGCCACCC
TTGTGCTGAATTCCCTGCAGGACTTCCAGCCCGAGCTGTTTGGTTTGCCCCCTTATGAGTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004616 ortholog_one2one 1 retrogene
retro_acar_48,
Choloepus hoffmanni ENSCHOG00000001318 ortholog_one2one 5 retrogenes
retro_chof_1597, retro_chof_1855, retro_chof_1883, retro_chof_2136, retro_chof_2168,
Homo sapiens ENSG00000130021 ortholog_one2one 2 retrogenes
retro_hsap_2469, retro_hsap_454,
Gorilla gorilla ENSGGOG00000004425 ortholog_one2one 1 retrogene
retro_ggor_1537,
Microcebus murinus ENSMICG00000017082 ortholog_one2one 1 retrogene
retro_mmur_1321,
Macaca mulatta ENSMMUG00000017377 ortholog_one2many 1 retrogene
retro_mmul_244,
Monodelphis domestica ENSMODG00000017505 ortholog_one2many 2 retrogenes
retro_mdom_1374, retro_mdom_52,
Pongo abelii ENSPPYG00000020105 ortholog_one2one 2 retrogenes
retro_pabe_1837, retro_pabe_280,
Pteropus vampyrus ENSPVAG00000011149 ortholog_one2one 1 retrogene
retro_pvam_1165,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_345 79.74 97.00
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2. retro_tsyr_542 73.37 77.25
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3. retro_tsyr_931 74.46 77.25
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4. retro_tsyr_2013 65.52 61.37
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Download FASTA sequences of all ENSTSYG00000013238 retrocopies