Parental gene: | MAP1LC3A, ENSSTOG00000006158 |
| Aliases: | None |
| Description: | microtubule-associated protein 1 light chain 3 alpha [Source:HGNC Symbol;Acc:6838] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393371.1:6105168..6106333(-) |
>ENSSTOG00000006158
CGCGCGATGCCCTCGGACCGGCCTTTCAAGCAGCGGCGGAGCTTCGCCGACCGCTGTAAGGAGGTGCAGCAGATCCGCGA
CCAGCACCCCAGCAAGATCCCGGTGATCATTGAGCGCTACAAGGGAGAGAAGCAGCTGCCTGTCCTGGACAAGACCAAGT
TCCTGGTCCCAGACCATGTCAACATGAGCGAGTTGGTCAAGATCATCCGGCGCCGCCTGCAGTTGAACCCCACGCAGGCC
TTCTTCCTGCTGGTGAACCAGCACAGCATGGTGAGCGTGTCCACACCCATCGCGGACATCTACGAGCAGGAAAAGGATGA
GGATGGATTCCTCTACATGGTCTACGCCTCCCAGGAAACCTTCGGCTTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000012407 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000022040 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002694 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017814 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002246 | within_species_paralog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014826 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_287 | 58.20 | 98.37 | Please wait, loading  |
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| 2. | retro_itri_988 | 57.94 | 84.55 | Please wait, loading |
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Download FASTA sequences of all ENSSTOG00000006158 retrocopies