Parental gene:

TKTL1, ENSSTOG00000005014

Aliases:None
Description:transketolase-like 1 [Source:HGNC Symbol;Acc:11835]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393619.1:1048698..1083994(+)


>ENSSTOG00000005014
ATGGCCAAGGAGGCCAGACCCGACGAGAAGACAGTGCAGGTGTTGCGGGATATGGCTAACCGCCTGCGCATCCATTCCAT
CAGGGCCACTTGCGCTTCGAGCTCCGGCCACCCTACATCATGCAGCAGTGCTGCTGAGATCATGTCTGTGCTTTTCTTCC
ACACGATGAGATATAAACAGTCAGACCCAGAGAACCCAGACAACGACCGATTCATCCTCTCAAAGATTAACACAATACCA
TTATGTTATTCAGAGTGGCTTACATTCAGCACTGGAAATCTGCCTGACATTCTTGTCCTACAGCTGCTCCTAGGTTCATT
GGGTCCCAGACTGTCCTTTGTTGATGTGGCAACAGGATGGCTTGGGCAAGGACTGGGGGCTGCGTGTGGGATGGCATATA
CTGGCAAGTACTTTGACCAGGCCAGCTACCGTGTGTTCTGCCTCCTGGGAGATGGTGAGTCGTCTGAAGGCTCTGTCTGG
GAGGCATTGGCCTTCGCTTCCTACTACAGTCTGGATAATCTTGTGGTGATCTTTGATGTGAACCGCCTGGGACATGGTGG
CACCTTGCCCCTTGAGCACTGCATAGAAGTCTATCAGAAGCGCTGTGAAGCCTTTGGGTGGAACACTTATGTGGTGGATG
GTCGTGATGTGGAGGCACTGTGCCAGGTGTTCTGGCAAGCAGCCCAAGTGAAAAGCAAGCCCACTGCCGTGGTTGCCAAG
ACCTTCAAGGGCCGGGGCATGCCAAATGTTGAAGATGCAGAAAATTGGTATGGAAAACCAATGCCAAAAGAAAGAGCAGA
TGCAATTATCAAATTAATTGAGAGCCAGATACAGACCAACAGGAGTCTTTTACCACAACCCCCTATTGAGGATTCACCTC
AAGTCAATATCATGGATATAAAAATGACCTGTCCACCTGCTTATGAAGTTGGCGATGTGGTAGCTACTCGAAAAGCATGT
GGTTTGGCTCTAGCTAAGCTGGGCCATGCAAACAACAGAGTCATTGTGCTGGATGGTGACACCAAGAACTCCACCTTCTC
TGAGATATTCAAGAAAGAACACCCTGAACGATTCATCGAGTGTTTTATTGCTGAGCAAAACATGGTGAGCGTGGCACTGG
GCTGTGCCACCCGTGGTCGGACCATTGCTTTTGCTAGCACTTTTGCTGCCTTTTTGACCCGAGCATTTGATCAGATCCGC
ATGGGAGCCATCGCTCAAATCAACATCAACCTTATTGGTTCTCACTGTGGGGTGTCCGTTGGTGAAGATGGCCCTTCCCA
GATGGCCCTGGAAGATCTGGCTATGTTCCGAGCAGTTCCCAACTGCACTATTTTTTATCCAAGTGATGCTGTCTCCACGG
AACATGCTATTTATTTAGCAGCCAATACCAAGGGAATGTGTTTCATTCGAACCAGCCGGCCAGAAACTGCAGTTCTTTAT
ACCCCTCAAGAAACCTTTAAGATTGGACAGGCTAAGGTTGTCCGCCAAAGTGTCAATGACAAAGTCACGGTTATTGGAGC
TGGAATTACTCTGCATGAAGCCTTAGTGGCTGCTGATGATCTCTCTAAACAAGATATTTTTATCCGTGTCATTGATCTGT
TTACCATTAAACCCCTGGATGTTGCCACCATCATTTCCAATGCAAGAGCCACAGGCGGCCGGATTATCACAGTGGAGGAT
CACTACCCAGAAGGTGGCATTGGGGAAGCTGTCTCTGCAGCTGTCTCCATGGAGCCTGACATCCTGGTTCATCAGCTGGC
AGTGATGGGAGTGCCTCGGAGCGGGAGACCCAGCGAGCTGCTGGATACATTTGGAATCAGTGCCAGACACATCATTGTGG
CTGTGAAATGCATGTTGATGAACTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018441 ortholog_one2one 1 retrogene
retro_amel_119,
Equus caballus ENSECAG00000021992 ortholog_one2one 1 retrogene
retro_ecab_6,
Felis catus ENSFCAG00000011392 ortholog_one2one 1 retrogene
retro_fcat_84,
Loxodonta africana ENSLAFG00000005145 ortholog_one2one 1 retrogene
retro_lafr_6,
Pongo abelii ENSPPYG00000020870 ortholog_one2one 1 retrogene
retro_pabe_205,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_30 84.20 83.57
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Download FASTA sequences of all ENSSTOG00000005014 retrocopies