Parental gene:

ENSSSCG00000009290

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:11:2038585..2124705(-)


>ENSSSCG00000009290
ATGCTGAATCTCCCCCAGCCCTCGAGGGATTCTCCGACGCTGCTCACGCCTGGAATGATGGAAAACCTCTTCCACGAGAT
GGGACACGCCATGCATTCGATGCTGGGCCGGACTCGCTACCAGCACGTCACCGGGACCAGGTGCCCCACGGACTTCGCCG
AGGTCCCGTCCATCCTGATGGAGTACTTCGCCGCCGACTACCGCGTGGTGCAGCAGTTCGCCCGCCACTACCAGACGGGC
CAGTCACTGCCCAGAAGCATGGTGTCCCGACTCTGCGAGTCTAAAAAGGTCTGCGCTGCGGCCGACATGCAGCTCCAGGT
CTTCTACGCGGCTCTGGATCAGCTCTACCACGGCCCGCACCCCCGGGGGCGGTGCACCACGGACGTCCTCAGAGCCACGC
AGGAGAGGTTCTACGGCCTGCCCTACGTCCCCGGCACGGCCTGGCAGCTGCGGTTCAGCCACCTCGTGGGCTACGGTGCC
AAGTACTACTCATACCTGATGTCGCGGGCGGTGGCCTCCATGGTCTGGAGAGAGTGTTTCCTACAGGATCCTTTCAACAG
GGCGGCGGGGGAGCGCTACCGGCGGGAGATGCTGGCGCACGGCGGGGGCAAGGAGCCCCTGCTCATGGTGGAAGGTATGC
TTCAGAAGCGCCCTTCCATCGACGACTTCGTAAACGCCCTCGTGTGCGACTTGGATCTGGACGCGGAGAGCTTCCTCGCG
GACTCGGAGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 22 .56 RPM
SRP014902_testis 30 .27 RPM
SRP018288_heart 14 .96 RPM
SRP018288_kidney 21 .57 RPM
SRP018288_liver 7 .84 RPM
SRP018288_lung 11 .51 RPM
SRP018856_adipose 13 .69 RPM
SRP035408_brain 8 .70 RPM
SRP035408_liver 12 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000027001 ortholog_one2many 1 retrogene
retro_hsap_3891,
Gorilla gorilla ENSGGOG00000009424 ortholog_one2many 1 retrogene
retro_ggor_2619,
Macaca mulatta ENSMMUG00000006942 ortholog_one2many 1 retrogene
retro_mmul_1732,
Nomascus leucogenys ENSNLEG00000013401 ortholog_one2many 1 retrogene
retro_nleu_1131,
Pongo abelii ENSPPYG00000005207 ortholog_one2many 1 retrogene
retro_pabe_3172,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_415 55.21 77.78
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Download FASTA sequences of all ENSSSCG00000009290 retrocopies