Parental gene:

ENSSSCG00000006846

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:4:121866217..121880976(+)


>ENSSSCG00000006846
TTGTTTATAAACTTTCAGTGCCATAGCGTGGTTGAAGAGGTTCCCAGCAAAAGGATAATTAAGTTTAATCCTCCGTTATA
CAAACAACGTTACCAGTTTGTTAAAAATTTAGTGGAGCAACATCAGCCTCAAAAGGTTGCAGACCTGGGGTGTGGTGATC
TTTCGCTCCTATCGATATTAAAATACCTAAAGTGTGTCACAGAGCTTGTCGGAGTAGACATCAATGAAGGCAGACTTAAA
TGGAATGGGTCTCGGCTGTCCCCATGTGTGGGGGACCATCTGGATCCCCGCGAGCTGGATTTAGTCATTACCTTGTATCA
TGGCTCTGTTTTGGAGAAAGACTGTCGTTTGCTCGGATTTGACTTGGTAACATGTATTGAACTAATAGAACATTTTGATT
CAGAAGATCTGGCCAGGTTTCCCGAAGTTGTTTTTGGGTACATGTCTCCAGCCATGATTGTCATCAGCACACCGAACTCT
GATTTCAATTCCCTGTTTCCGCTCTCAGTCTTCAGAGATTCAGATCACAAATTTGAGTGGAGTAGAGTGCAGTTTCAGAC
CTGGGCTTTAGATGTGGCAAATCGCTATAGCTACTCAGTGGAGTTCACCGGTGTAGGGGAACCGCCGGCAGAAGCTGAGG
ATGTTGGATATTGTACCCAGATAGGGGTCTTCCGGAAGAAAGAAAAGACAACTGAATCTGATGTTTTGGAGCACCCTGGC
GAACGTGTTTATGAAGTTGTTTATACGACCTCATACCCAAGTTTACAGCAAATAAATTACCGTAGACGTGTTGTGGTTTA
TCTGGTATACCGAGAAGTGAACAAAATGAGACTGAGATACCAAGTGAGTCTGAGGCGGCACGAACTGGAACCTGAGTCCA
CAGACCCTGACGACCCCAGAAGAAAATTCATCTCAGGCCTTCCAGTTCATACACCCACAGAAGCTGACAAAGCCATGGCG
ATGACTCCCCAACCTTTCTGTATTGGAGATAAGTTTTACGTACCCCTGAAAAGAATCATTGCTTATCCCAGGCTGGGGTA
CTTATGTGGTAATGTGCAGGAGCTGAGAGAGCTCCTCGCGGACTCAATAGAACTGAACTGTGACGCGTCTGCGGTGAAGG
TTGACTTGTATCACTGTAGTGACTAC

Library Parental gene expression (RPM)
SRP014902_placenta 1 .33 RPM
SRP014902_testis 2 .97 RPM
SRP018288_heart 0 .05 RPM
SRP018288_kidney 0 .79 RPM
SRP018288_liver 0 .32 RPM
SRP018288_lung 0 .20 RPM
SRP018856_adipose 0 .00 RPM
SRP035408_brain 0 .16 RPM
SRP035408_liver 0 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004357 ortholog_one2many 1 retrogene
retro_amel_532,
Otolemur garnettii ENSOGAG00000013441 ortholog_one2many 4 retrogenes
retro_ogar_1961, retro_ogar_2013, retro_ogar_2135, retro_ogar_562,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_80 99.20 98.69
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Download FASTA sequences of all ENSSSCG00000006846 retrocopies