Parental gene:

RGD1564865, ENSRNOG00000038361

Aliases:RGD1564865, RGD1309566
Description:20-alpha-hydroxysteroid dehydrogenase-like [Source:RefSeq peptide;Acc:NP_001157868]
Organism:Rat (Rattus norvegicus)
Coordinates:17:71182339..71211047(+)


>ENSRNOG00000038361
ATTCCTGCAAGTAAGATTTTGGAGTCTACAAAAATAGCAATAGATATTGGGTTCCGCCATATTGATTCTGCTTATGTATA
TAAAAATGAAAAGGAAGTAGGAGAGGCTATTCGAAGCAAGATTACAGGTGGTGTTGTGAAAAGAGAAGACATATTTCTCA
CTACAAAGCTTTGGAGTACATTCCATCGACCAGAACTGGTCCGAGTTGGCTTAGAAAGATCACTCAAAAGCTTTCAACTA
GATTATGTTGACCTCTATCTTATTCATTACCCAATATCAATTAAGCCATCAGAGGAGATATATACAAAAGATGAAAATGG
AAAAATATTGTTTGAGACAGTAGATCTCTGTGCCATATGGGAGGCCATGGAAAAGTGTAAGGATGCAGGTTTGGCCAAGT
CCATCGGGGTGTCCAACTTTAACCGCAGGCAGCTAGAGATGATCCTGAACAAGCCGGGGCTCAAGCACAGGCCTGTGTGT
AACCAGGTAGAATGTCACCCTTATCTGAACCAGAGCAAGCTGATGGATTTCTGCAAGTCACAAGACATTGTTCTTGTTGC
CTATGCAGCCCTGGGGTCTCAGCGACCTACAAATTGGGTGGACAAGAATGCCCCATTTCTTTTGAATGACCCAGTTCTTG
GTGGCATGGCCAAAAAACACAATCGAAGTCCAGCTCAGATTGCCCTTCGCTACCAGGTACAGCGTGGGGTTGTTGCCCTG
GCCCAAACTTATGAACAGAAGGAGATGAAAGAGAACATTCAGGTATTTGAATTTCAGTTGCCTTCCGAGGATATGGAAGT
CCTAGATGGCCTGAACAGAAACTTCAGGTATTTTCCTGTGAACATAGCTGCTGAACACCCTAATTATCCATATTCTGATG
ACTATTAG

Library Parental gene expression (RPM)
SRP017611_brain 0 .00 RPM
SRP017611_kidney 116 .05 RPM
SRP017611_liver 1 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008668 possible_ortholog 1 retrogene
retro_chof_568,
Echinops telfairi ENSETEG00000009155 possible_ortholog 1 retrogene
retro_etel_352,
Rattus norvegicus ENSRNOG00000009513 other_paralog 1 retrogene
retro_rnor_1438,
Rattus norvegicus ENSRNOG00000009734 other_paralog 3 retrogenes
retro_rnor_2380, retro_rnor_2588, retro_rnor_657,
Rattus norvegicus ENSRNOG00000013004 within_species_paralog 1 retrogene
retro_rnor_2559,
Rattus norvegicus ENSRNOG00000017165 other_paralog 1 retrogene
retro_rnor_1441,
Sarcophilus harrisii ENSSHAG00000006005 ortholog_one2many 1 retrogene
retro_shar_520,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2046 69.52 71.19
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Download FASTA sequences of all ENSRNOG00000038361 retrocopies