Parental gene: | Nop2, ENSRNOG00000018453 |
| Aliases: | Nop2, Nol1 |
| Description: | putative ribosomal RNA methyltransferase NOP2 [Source:RefSeq peptide;Acc:NP_001178714] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 4:224663954..224675686(+) |
>ENSRNOG00000018453
ATGGGGCGCAAGTTGGATCCTACGAAGAAGGAGAAGCGTGGGCCCGGCCGAAAGGCTCGAAAGCAGAAGGGTGCAGAGAC
CGAACTGATCAGATTTTTGCCTGCAGCTGGTGATGAGAATTTCAAGAGGCTGTCCAGTCGTGCTCGGAAGAGGGCGGCCA
AGAGGAGGTCAGGGTCTGTTGAAGTCCCTAAGCCAAATAAGTCTCCTGGGATCAAAACATTGCCTGGAGAGTTACCCAAA
GGAGCAGTCCAGGTTCGAGGTAAGAAGCGTCCAGCACCAATTCAAAACAGTGATGGGGATGAGGAGGAAGACTCTGAGGA
AGAAGATGTGGTGACCCAGGGGGAACTTTGGGGCTCTGAAGACAGTAGTGAAGATATGGTGGACGACTATGGAGCGGACT
CGGAGGATGAGGAGGAAAAGTTGTTGCCTATTGAAAGAGCTGCTCTGAAGCAGAAGGCCCGGGACCCCGCAGATGGGACC
CAGTGGAGTGAGGAGGACACTGATGAAGATGAAGGTGTTACCCCTGAGTCCCACCCCAGAAAGGATGACAAAGCAGAGGG
GGATTTGCAGATCAATGTGGAAGAGGAGGAAGCCTTCGTGCTGCCTCCTGCTGGACAGACGGACCAGGATGCCCAGACTC
CAGACCTGCAGCGAGTTCACAAGCGCATCCAGGATATAGTAGGAGTGCTTCGGGATTTTGGGGCTCAGCGAGAGGAAGGC
CGGTCTCGAACTGAGTATCTGAGTCAGCTTCAGAAGGATCTGGCCACCTACTATTCTTATGGAGACTTCCTGTTGAGCAA
GCTCATGGAGCTGTTCCCGCTGTCTGAGTTGATAGAGTTCTTAGAAGCTAATGAGGTGCCCCGGCCAATCACCCTTCGGA
CCAACACCTTGAAAACCCGTCGCCGAGACCTTGCTCAGGCTCTGATCAATCGTGGGGTTAATCTGGATCCATTGGGAAAG
TGGTCGAAGTCTGGACTTGTGGTATATGATTCTTCAGTGCCTATTGGTGCTACTCCCGAGTACCTAGCTGGACACTATAT
GCTGCAGGGAGCTTCGAGCATGCTGCCTGTCATGGCCCTGGCACCTCAGGAGCATGAGCGGATCTTGGACATGTGTTGTG
CTCCCGGAGGAAAGACCAGCTACATAGCTCAGCTGATGAAGAACACGGGTGTGATCCTTGCCAATGACGCCAATGCAGAG
CGGCTCAAGAGTGTCGTGGGCAACCTGCACCGCTTGGGAGTCACCAACACCATCGTCAGCCACTATGATGGGCGCCAGTT
CCCCAAGGTGGTGGGCGGCTTTGATCGGGTGCTTCTGGACGCTCCTTGCAGTGGCACAGGAGTCATCTCCAAAGACCCTG
CTGTGAAGACGAACAAGGATGAGAAGGACATCCAGCGCTGTGCCCACCTTCAGAAGGAATTGCTGCTCAGTGCTATAGAC
TCAGTCAACGCTGCCTCCAAGACCGGAGGCTACCTGGTCTACTGCACTTGCTCCATTACGGTGGAAGAGAACGAGTGGGT
GGTGGACTATGCCTTGAAGAAGAGGAATGTGCGGCTGGTGCCCACCGGCCTGGACTTCGGGCAGGAAGGTTTCACCCGCT
TCCGAGAAAGGCGCTTTCACCCCACTCTGCGGGCCACCCGACGCTTCTACCCTCACACTCACAATATGGATGGTTTCTTT
ATAGCCAAGTTCAAGAAATTTTCCAATTCTATCCCCCAGCCCCACTCAGGAAACTCGGCAGCAGGTACTCCTACAGAACC
TGACCTGAAGGGTCAGGTCACCCCAAAGTCTGAGAACAGTAGTCAGCCCACCAAGAAAGCCCACGGGGCTGCAAAGGCAA
AGCAGCAGTTAGTAGGGCAGCAACATTCCAAGAAGCCCTTCCAGAAGATGAATGGCATCTCCAAAGGGCCAGGCTTGCCC
ACTGAACCTTCTGTCCCAAATGTCCAAGTGTCTGCTAGGCCCCAGGAAAGCAGTCTGTCTGATGTGAAACGGAAGAGGGC
TGGAAAGCTGAAGCAGCGGGGACCGAAGCAGAGTGCCCCTCCCCCCAAGGTCGGGGACCTGGGGACACCTGCTATGCAGA
CTCCCTCTGAAATCAGTGCCACCCCAAGGCCTAAGTCCCCTGGGAAAGCCAAAAAGAGAGAGGAAGTAAAGCAGGAGTTA
CCAGAGCAGCCTGCCAAGGGAACTGCTTCCCTGAAAGAAGACGCTGCCCCCAAGAGACTCTCTTCCCCCACCACGGCTCA
CCACAGTTCCACCAGGCCCCCACCGGCAAAGAGGAGGAAATCTATGACCAAGGGCAGCAGCCAGCCACTGTTGTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 18 .19 RPM |
| SRP017611_kidney | 14 .58 RPM |
| SRP017611_liver | 14 .32 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2003 | 90.19 | 76.04 | Please wait, loading  |
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| 2. | retro_rnor_2538 | 98.36 | 94.56 | Please wait, loading |
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| 3. | retro_rnor_2775 | 91.16 | 63.86 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000018453 retrocopies