Parental gene:

IK, ENSPPYG00000015861

Aliases:None
Description:protein Red [Source:RefSeq peptide;Acc:NP_001126465]
Organism:Orangutan (Pongo abelii)
Coordinates:5:142138514..142153165(+)


>ENSPPYG00000015861
ATGCCGGAGCGAGATAGTGAGCCGTTCTCCAACCCTTTGGCCCCCGATGGCCACGATGTGGATGATCCTCACTCCTTCCA
CCAATCAAAACTCACCAATGAAGACTTCAGGAAACTTCTCATGACCCCCAGGGCTGCACCCACCTCTGCACCACCTTCTA
AGTCACGTCACCATGAGATGCCAAGGGAGTACAATGAGGATGAAGACCCAGCTGCACGAAGGAGGAAAAAGAAAAGTTAT
TATGCCAAGCTACGCCAACAAGAAATTGAGAGAGAGAGAGAGCTAGCAGAGAAGTACCGGGATCGTGCCAAGGAACGGAG
AGATGGAGTGAACAAAGATTATGAAGAAACCGAGCTTATCAGCACCACAGCTAACTACAGGGCTGTTGGCCCCACTGCTG
AGGCGGACAAATCAGCTGCAGAGAAGAGAAGACAGTTGATCCAGGAGTCCAAATTCTTGGGTGGTGACATGGAACACACC
CATTTGGTGAAAGGCTTGGATTTTGCTCTGCTTCAAAAGGTACGAGCTGAGATTGCCAGCAAAGAGAAAGAGGAAGAGGA
ACTGATGGAAAAGCCCCAGAAAGAAACCAAGAAAGATGAGGATCCTGAAAACAAAATTGAATTTAAAACACGTCTGGGCC
GCAATGTTTACCGAATGCTTTTTAAGAGCAAAGCATATGAGCGGAATGAGTTGTTCCTGCCGGGCCGCATGGCCTATGTG
GTAGATCTGGATGATGAGTATGCTGACACAGATATCCCCACCACTCTTATCCGCAGCAAGGCTGATTGCCCCACCATGGA
GGCCCAGACCACACTGACCACAAATGACATTGTTATTAGCAAGCTGACCCAGATCCTTTCATACCTGAGGCAGGGAACCC
GTAACAAGAAGCTTAAGAAGAAGGATAAAGGGAAGCTGGAAGAGAAGAAACCTCCTGAGGCTGACATGAATATTTTTGAA
GACATTGGGGATTACGTACCCTCCACAACCAAGACACCTCGGGACAAGGAGCGGGAGAGATATCGGGAACGGGAGCGTGA
TCGGGAGAGAGACAGAGACCGTGACCGAGAGCGAGAGCGAGAACGAGATCGGGAACGAGAGCGAGAGCGGGACCGAGAGA
GAGAAGAGGAAAAGAAGAGACACAGCTACTTTGAAAAGCCAAAAGTAGATGATGAGCCCATAGACGTTGACAAAGGACCT
GGGTCTGCCAAGGAGTTGATCAAGTCCATCAATGAAAAGTTTGCTGGGTCTGCTGGCTGGGAAGGCACAGAATCATATCC
TTTAATACACAAAAAGCAGCTGGGAGATTTCTTTGGCATGTCCAACAGTTATGCAGAGTGCTACCCAGCCACGATGGATG
ACATGGCTGTGGATAGTGATGAGGAGGTGGATTATAGCAAAATGGACCAGGGTAACAAGAAGGGGCCCTTAGGCCGTTGG
GACTTTGATACCCAGGAAGAATACAGCGAGTATATGAACAACAAAGAGGCTTTGCCCAAGTTAGCGGGTATGTATGGTAT
CAAAATGTCTGAAGGGCGGAAAACCAGGCGCTTCAAGGAAACTAATGACAAAGCAGAGCTTGATCGCCAGTGGAAGAAGA
TTAGTGCAATCATTGAGAAGAGGAAGAAGATGGAAGCTGATGGGGTTGAAGTCAAAAGGCCAAAATACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 107 .98 RPM
SRP007412_cerebellum 121 .24 RPM
SRP007412_heart 53 .86 RPM
SRP007412_kidney 89 .66 RPM
SRP007412_liver 63 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000009727 ortholog_one2one 3 retrogenes
retro_dnov_618, retro_dnov_714, retro_dnov_960,
Dipodomys ordii ENSDORG00000006584 ortholog_one2one 4 retrogenes
retro_dord_128, retro_dord_130, retro_dord_134, retro_dord_139,
Homo sapiens ENSG00000113141 ortholog_one2one 1 retrogene
retro_hsap_2262,
Gorilla gorilla ENSGGOG00000013374 ortholog_one2one 1 retrogene
retro_ggor_1685,
Loxodonta africana ENSLAFG00000008152 ortholog_one2one 1 retrogene
retro_lafr_362,
Otolemur garnettii ENSOGAG00000014281 ortholog_one2one 1 retrogene
retro_ogar_1402,
Sorex araneus ENSSARG00000007388 ortholog_one2one 3 retrogenes
retro_sara_416, retro_sara_419, retro_sara_558,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1954 91.24 63.13
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Download FASTA sequences of all ENSPPYG00000015861 retrocopies