Parental gene: | PDZD8, ENSPPYG00000002691 |
| Aliases: | None |
| Description: | PDZ domain containing 8 [Source:HGNC Symbol;Acc:26974] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:116746027..116852970(-) |
>ENSPPYG00000002691
ATGGGGCTGCTGCTCATGATCCTGGCGTCGGCCGTGCTGGGTTCCTTCCTCACGCTCCTCGCACAGTTCCTTCTGCTGTA
CCGCAGACAGCCCGAGCCACCGGCGGACGAGGCCGCCCGCGCGGGCGAGGGCTTCCGCTACATCAAGCCAGTGCCGGGCC
TGCTCCTAAGGGAGTACCTTTATGGCGGCGGCCGGGATGAGGAGCCCTCCGGAGCGGCCCCTGAGGGCGGCGCGACCCCC
ACCGCGGCCCCCGAGACCCCCGCCCCGCCGACGCGGGAGACTTGCTACTTCCTCAACGCCACCATCCTATTCCTGTTCCG
GGAGTTGCGGGACACCGCGCTGACCCGCCGCTGGGTCACCAAGAAGATCAAGGTGGAGTTCGAGGAGCTGCTGCAGACCA
AGACGGCCGGGCGCCTGCTGGAGGGGCTGAGCCTGCGGGACGTGTTCCTGGGCGAGACGGTGCCCTTCATCAAGACCATC
CGGCTCGTCCGGCCCGTCGTGCCCTCGGCCACCGGGGAGCCCGACGGCCCTGAAGGGGAGGCGCTGCCCGCCGCCTGCCC
CGAGGAGCTGGCCTTCGAGGCGGAGGTGGAGTACAACGGGGGCTTCCACCTGGCCATCGACGTGGACCTGGTCTTCGGCA
AGTCCGCCTACTTGTTTGTCAAGCTGTCCCGCGTGGTGGGGAGGCTGCGCTTGGTCTTCACGCGCGTGCCCTTCACCCAC
TGGTTCTTCTCCTTCGTGGAGGACCCGCTGATCGACTTCGAGGTGCGCTCCCAGTTTGAAGGGCGGCCCATGCCCCAGCT
CACCTCCATTATCGTCAACCAGCTCAAGAAGATCATCAAGCGCAAGCACACCCTGCCGAATTACAAGATCAGGTTTAAGC
CGTTTTTTCCATACCAGACCTTGCAAGGATTTGAAGAAGATGAAGAGCATATCCATATACAACAATGGGCACTTACTGAA
GGCCGTCTTAAAGTTACATTGTTAGAATGTAACAGGTTACTCATTTTTGGATCCTATGACAGAGAGGCAAATGTTCATTG
CACACTTGAGTTAAGCAGTAGTGTTTGGGAAGAAAAACAGAGGAGTTCTATTAAGACGGTTGAATTAATAAAAGGAAATT
TACAAAGTGTTGGACTTACACTTCGTCTTGTCCAGTCAACTGATGGGTATGCTGGGCACGTTATCATTGAAACTGTGGCT
CCAAACTCGCCTGCTGCAATTGCAGATCTTCAGCGGGGAGATCGACTTATCGCCATTGGAGGTGTGAAAATCACATCAAC
ACTGCAAGTGTTGAAGCTTATCAAGCAGGCTGGTGACCGAGTCCTGGTGTACTATGAAAGGCCTGTTGGCCAGAGTAATC
AAGGTGCAGTGCTGCCAGATAACTTTGGCCAGTTGGAAGAAAACTTTTTGTCAAGCTCATGCCAATCGAGTTATGAAGAG
GAAGCTGCTGGGTTAACAGTAGATACTGAAAGTAGAGAGCTGGATTCTGAATTTGAAGACTTGGCAAGTGATGTCAGAGC
ACAAAATGAGTTCAAAGATGAGGCACAATCATTAAGTCACAGTCCCAAACGTGCTCCAACAACACTTTCTATTAAACCCC
TTGGAGCTATATCACCAGTTTTAAACCGTAAATTAGCTGTAGGAAGTCACCCACTACCACCAAAAATTCAGTCCAAAGAT
GGAAATAAACCTCCACCCCTAAAAACTTCTGAGATAACAGACCCAGCACAAGTGTCAAAACCAACCCAAGGATCTGCTTT
CAAACCACCTGTGCCACCACGACCACAAGTGAAAGTTCCTTTGCCTTCCGCTGATGCTCCAAATCAGGCAGAACCAGATG
TTCTCGTTGAAAAGCCAGAGAAGGTGCCACCGCCTCCTCTTGTAGATAAATCTGCTGAAAAGCAAGCAAAAAATGTGGAT
CCCGTAGACGATGCAGCTGCATCTAAGCAATTTTTAGCAAAGCAAGAAGTGGCCAAAGATGTCATTTCAGAAACTTCCTG
CCCTACTAAGGACAGTTCGGACGACCGTCAAACATGGGAATCATCAGAAATTCTTTATCGTAATAAGCTAGGAAAATGGA
CAAGAACCAGAGCATCCTGTTTGTTTGACATAGAAGCCTGTCACAGGTACTTAAACATTGCATTGTGGTGCAGGGATCCT
TTTAAGTTGGGAGGTCTCATCTGTTTGGGGCATGTTAGTTTAAAACTTGAAGATGTGGCTTTAGGATGCCTAGCTACATC
AAACATGGAATACCTTTCCAAATTGAGACTGGAAGCCCCCTCACCTAAGGCTATAGTCACTAGAACCGCACTACGCAATC
TGAGTATGCAAAAGGGATTCAATGACAAATTTTGCTATGGTGACATTACTATTCACTTCAAATATTTGAAAGAAGGAGAA
TCAGACCACCATGTAGTTACTAACGTAGAAAAAGAAAAAGAACCCCATTTGGTTGAAGAAGTTTCTGTTCTCCCTAAAGA
GGAGCAATTTGTTGGACAGATGGGTTTAACAGAAAACAAACACAGTTTCCAGGATACTCAGTTCCAGAACCCAACATGGT
GTGACTACTGTAAGAAAAAAGTTTGGACTAAAGCAGCTTCCCAGTGTATGTTTTGTGCTTATGTTTGCCATAAAAAATGT
CAAGAAAAGTGTCTAGCTGAGACTTCTGTTTGTGGAGCAACTGATAGGCGAATAGACAGGACACTGAAAAACCTTAGGCT
GGAAGGACAGGAAACCCTCTTAGGCCTGCCTCCTCGTGTTGATGCTGAAGCTAGCAAGTCAGTCAATAAAACAACAGGTT
TGACAAGGCATATTATCAATACTAGTTCTCGTTTATTAAATTTGCGTCAAGTCTCTAAAACTCGCCTTTCCGAACCAGGA
ACCGATCTCGTAGAACCTTCACCAAAACACACACCCAACACGTCAGACAACGAAGGCAGTGACACGGAGGTCTGTGGTCC
AAACAGTCCTTCTAAACGGGGAAACAGCACAGGAATAAAGTTAGTGAGAAAAGAGGGTGGTCTGGATGACAGTGTTTTCA
TTGCAGTTAAAGAAATTGGTCGTGATCTGTACAGGGGCTTGCCTACAGAGGAAAGGATCCAGAAACTAGAGTTCATGTTG
GATAAGCTACAGAATGAAATTGATCAGGAGTTGGAACACAATAATTCCCTTGTTAGAGAAGAAAAAGAGACAACTGATAC
AAGGAAAAAATCACTTCTTTCTGCTGCCTTAGCTAAATCAGGTGAAAGGCTACAAGCTCTAACACTTCTTATGATCCACT
ACAGAGCAGGCATTGAAGATATAGAAACTTTAGAAAGTCTGTCTTTAGACCAGCACTCCAAAAAAATAAGCAAGTACACA
GATGATACAGAAGAAGACCTTGATAATGAAATAAGCCAACTAATAGACTCTCAGCCATTCAGCAGCATATCAGATGACTT
ATTTGGCCCATCCGAGTCTGTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .09 RPM |
| SRP007412_cerebellum | 24 .44 RPM |
| SRP007412_heart | 6 .68 RPM |
| SRP007412_kidney | 13 .52 RPM |
| SRP007412_liver | 17 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sus scrofa | ENSSSCG00000010669 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1449 | 93.30 | 89.08 | Please wait, loading  |
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Download FASTA sequences of all ENSPPYG00000002691 retrocopies