Parental gene:

LIN28B, ENSOCUG00000017850

Aliases:None
Description:lin-28 homolog B (C. elegans) [Source:HGNC Symbol;Acc:32207]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:12:93038039..93150448(+)


>ENSOCUG00000017850
ATGGGATTTGGATTCATCTCCATGATAAACCGAGAGGGAAGCCCCTTGGATATTCCAGTCGATGTGTTTGTACACCAAAG
CAAACTATTCATGGAAGGATTTAGAAGCCTAAAAGAAGGAGAACCAGTGGAGTTCACATTTAAAAAATCTTCCAAAGGCC
TTGAATCAATACGGGTAACAGGACCTGGTGGGAGCCCCTGTTTAGGAAGTGAAAGAAGACCCAAAGGGAAGACACTACAA
AAAAGAAAACCAAAGGGAGATAGATGCTACAACTGTGGTGGCCTTGATCATCATGCTAAGGAATGCAGTCTACCTCCTCA
GCCAAAGAAGTGCCATTGCTGTCAGAGCATCCTGCACATGGTGGCAAACTGCCCACATAAAACTGCAGCACAGCCACCTG
CCAGTTCTCAGGGAAGACAGGAAGCAGAGTCCCAGCCGTGCACTTCGATGTTCCCTAGAGAAGCAGGAGGAGGGCAGGGC
TGCACGTCACCGCCGTTTGCTCAGGAGGCAAGGCCAGAGGTCCTAGAGCGGCCAGGCAGGTCCCCTCCAGAAGCTTCCTC
CACGAAGTCATCGGCAGCACCAGAAGAACCAAACAAAAAGGGGCCTTCAGTTCAAAAAAGGAAAAAGACATAA

Library Parental gene expression (RPM)
SRP017611_brain 0 .11 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000015340 ortholog_one2one 1 retrogene
retro_etel_1927,
Microcebus murinus ENSMICG00000002297 ortholog_one2one 4 retrogenes
retro_mmur_1377, retro_mmur_1390, retro_mmur_660, retro_mmur_800,
Oryctolagus cuniculus ENSOCUG00000000299 within_species_paralog 1 retrogene
retro_ocun_19,
Otolemur garnettii ENSOGAG00000011042 ortholog_one2one 1 retrogene
retro_ogar_645,
Sorex araneus ENSSARG00000008374 ortholog_one2one 2 retrogenes
retro_sara_121, retro_sara_746,
Tarsius syrichta ENSTSYG00000006480 ortholog_one2one 1 retrogene
retro_tsyr_1815,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_532 79.07 100.00
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Download FASTA sequences of all ENSOCUG00000017850 retrocopies