Parental gene:

FAM49B, ENSOCUG00000013690

Aliases:None
Description:family with sequence similarity 49, member B [Source:HGNC Symbol;Acc:25216]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:3:145625524..145675054(-)


>ENSOCUG00000013690
ATGACTGTGTATAGAACTATAGTATGTCATACACGGTACCTTAACATGGGGAATCTTCTTAAAGTTTTGACATGCACAGA
CCTTGAGCAGGGGCCAAATTTTTTCCTTGATTTTGAAAATGCCCAGCCTACAGAGTCTGAGAAGGAAATTTATAATCAGG
TGAATGTAGTCTTAAAAGATGCAGAAGGCATCTTGGAAGACTTGCAGTCATACCGAGGAGCTGGCCATGAAATACGTGAG
GCAATCCAGCATCCAGCAGATGAGAAGTTGCAAGAGAAGGCATGGGGTGCCGTTGTTCCACTAGTAGGCAAATTAAAGAA
ATTTTATGAATTTTCTCAGAGGTTAGAAGCAGCATTACGAGGTCTTTTGGGAGCCTTGACAAGTACCCCGTACTCTCCCA
CCCAGCATTTAGAGCGAGAGCAGGCTCTTGCTAAACAGTTTGCAGAAATTCTTCATTTTACACTCCGGTTTGATGAACTC
AAGATGACGAATCCTGCCATACAGAACGATTTCAGTTATTACAGAAGAACGTTGAGTCGGATGAGGATTAATAATGTTCC
AGCAGAAGGAGAAAATGAAGTAAATAATGAATTGGCAAATCGAATGTCTTTGTTTTATGCTGAGGCAACCCCAATGCTGA
AAACCTTAAGTGATGCCACGACAAAATTTGTCTCAGAGAATAAAAATTTACCAATAGAAAACACCACAGATTGTCTAAGC
ACCATGGCTAGTGTTTGCAGAGTCATGCTTGAAACACCGGAATACAGAAGCAGGTTTACAAATGAAGAAACAGTGTCCTT
CTGCTTGAGAGTAATGGTGGGTGTTATCATCCTCTATGACCATGTGCATCCAGTGGGAGCATTTGCCAAAACCTCCAAAA
TTGATATGAAAGGTTGTATCAAAGTTCTTAAGGACCAGCCTCCCAACAGTGTAGAAGGTCTTCTAAATGCTCTCAGGTAC
ACAACAAAACATTTGAATGATGAGACTACCTCCAAGCAAATTAAATCCATGCTGCAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 40 .45 RPM
SRP017611_kidney 7 .50 RPM
SRP017611_liver 4 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000009323 ortholog_one2one 3 retrogenes
retro_dnov_1596, retro_dnov_1723, retro_dnov_896,
Dipodomys ordii ENSDORG00000005160 ortholog_one2one 1 retrogene
retro_dord_381,
Echinops telfairi ENSETEG00000015647 ortholog_one2one 1 retrogene
retro_etel_1299,
Felis catus ENSFCAG00000015625 ortholog_one2one 1 retrogene
retro_fcat_1690,
Procavia capensis ENSPCAG00000002866 ortholog_one2one 3 retrogenes
retro_pcap_293, retro_pcap_332, retro_pcap_40,
Sus scrofa ENSSSCG00000005959 ortholog_one2one 1 retrogene
retro_sscr_978,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_953 98.48 96.76
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Download FASTA sequences of all ENSOCUG00000013690 retrocopies