Parental gene:

MALSU1, ENSOCUG00000008972

Aliases:None
Description:mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:21721]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:10:8389310..8397868(+)


>ENSOCUG00000008972
ATGGGGCCCGGATGCCGAGCGCTGAGGCTCTTCGGGTCCCGGCGTCGGCTGCTGGCAGCGGGGCGTCTTCCCTCGGCCCC
GGCGCCCGGCCCGGCCTGCCTGGCCGCGAGCCCTGTGCGCGGCCTACGCGTGGGTCCCAGGCTGGAAAAGGGGACGGAGG
CGGGTGCAGCCGACGAGGGACGGCCGGAGTCGGGCTCGGCAGATCATACTGGTCCCAAGTTTGACGTGGATTTGCTGGTT
TCCCTTCTGAGACAAGAAAATGCAAGAGACATCTGTGTGATCCAGGTCCCCCCAGAGATGAAGTACACAGACTACTTTGT
GATTGCTAGTGGAACGTCCACACGACACTTACATGCCATGGCCTGCTACCTTGTGAAGATGTACAAGTATCTGAAATGCC
GGAGTGAGCCTCATGTTAAGATTGAAGGGAAGGACACAGATGACTGGCTCTGTGTGGATTTTGGCAGCATGGTGATTCAC
TTGATGCTTCCAGAAACTAGAGAAACCTATGAATTAGAGAAATTATGGACCCTGCGTTCTTACGATGATCAGTTAGCTCA
GATAGCACCCGAAACATTACCTGAAGACTTCATTCTTGGAAGAGAAGACGACCCTGCATCTCTTATTCCAGTGGAGTTCA
AATGTGAATAA

Library Parental gene expression (RPM)
SRP017611_brain 19 .48 RPM
SRP017611_kidney 12 .87 RPM
SRP017611_liver 5 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002338 ortholog_one2one 1 retrogene
retro_chof_1878,
Equus caballus ENSECAG00000016105 ortholog_one2one 1 retrogene
retro_ecab_884,
Echinops telfairi ENSETEG00000015566 ortholog_one2one 1 retrogene
retro_etel_574,
Loxodonta africana ENSLAFG00000011921 ortholog_one2one 1 retrogene
retro_lafr_538,
Otolemur garnettii ENSOGAG00000017157 ortholog_one2one 1 retrogene
retro_ogar_2324,
Tursiops truncatus ENSTTRG00000008920 ortholog_one2one 1 retrogene
retro_ttru_1715,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_621 62.50 54.63
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Download FASTA sequences of all ENSOCUG00000008972 retrocopies