Parental gene:

COPS2, ENSOCUG00000006455

Aliases:None
Description:COP9 signalosome subunit 2 [Source:HGNC Symbol;Acc:30747]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:17:23273835..23305592(+)


>ENSOCUG00000006455
ATGTCTGACATGGAGGATGATTTCATGTGCGATGATGAGGAGGACTACGACCTGGAATACTCTGAAGATAGTAATTCTGA
GCCAAATGTGGATTTGGAAAATCAGTACTATAATTCTAAAGCATTAAAAGAAGATGACCCAAAAGCAGCATTAAGCAGTT
TCCAAAAGGTTTTGGAACTTGAAGGCGAAAAAGGCGAATGGGGATTTAAAGCACTGAAACAGATGATTAAGATTAACTTC
AAGTTGACAAACTTTCCAGAAATGATGAATAGATATAAACAACTATTGACCTATATTCGGAGTGCAGTCACAAGAAACTA
TTCTGAAAAATCCATTAATTCTATTCTTGATTATATCTCCACTTCTAAACAGAATTCTGATTTTTTATGTCAGATGGATT
TACTGCAGGAATTCTATGAAACAACACTGGAAGCTTTGAAAGATGCTAAGAATGATAGACTGTGGTTTAAGACAAACACA
AAGCTTGGAAAATTATATTTAGAACGAGAGGAATATGGAAAGCTTCAAAAAATTTTACGCCAGTTGCATCAATCCTGCCA
GACTGATGATGGAGAAGATGACCTGAAAAAAGGTACACAATTATTAGAAATATATGCTTTGGAAATTCAGATGTACACAG
CACAGAAAAATAACAAAAAACTTAAAGCACTCTATGAACAGTCACTTCACATCAAGTCTGCCATCCCTCATCCACTGATC
ATGGGAGTCATCAGAGAATGTGGTGGTAAAATGCACTTGAGAGAAGGTGAATTTGAAAAGGCACACACTGATTTTTTTGA
AGCCTTTAAGAATTATGATGAATCAGGAAGTCCAAGACGAACCACTTGCTTAAAATATTTGGTCCTAGCAAACATGCTAA
TGAAATCGGGAATAAATCCATTTGACTCACAGGAGGCCAAGCCGTATAAAAATGATCCAGAAATTCTAGCAATGACAAAT
TTAGTAAGTGCCTATCAGAATAATGACATCACTGAATTTGAAAAGATTCTGAAAACAAATCACAGCAACATAATGGATGA
TCCTTTCATAAGAGAACACATTGAAGAGCTTTTGCGAAACATCAGAACACAAGTGCTCATAAAATTAATTAAGCCTTACA
CAAGAATACATATTCCTTTTATTTCTAAGGAGTTAAACATAGATGTAGCTGATGTGGAGAGCTTGCTGGTCCAGTGCATA
TTGGATAACACTATTCATGGCCGAATTGATCAAGTCAACCAACTCCTTGAACTGGATCATCAGAAGAGGGGAGGTGCACG
ATATACTGCACTAGACAAATGGACCAACCAACTAAATTCTCTCAACCAGGCTGTAGTCAGCAAACTGGCA

Library Parental gene expression (RPM)
SRP017611_brain 50 .44 RPM
SRP017611_kidney 46 .42 RPM
SRP017611_liver 22 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013425 ortholog_one2one 1 retrogene
retro_btau_452,
Choloepus hoffmanni ENSCHOG00000013375 ortholog_one2one 7 retrogenes
retro_chof_1083, retro_chof_1288, retro_chof_2209, retro_chof_2371, retro_chof_2520, retro_chof_2550, retro_chof_678,
Callithrix jacchus ENSCJAG00000001585 ortholog_one2one 2 retrogenes
retro_cjac_3105, retro_cjac_3117,
Echinops telfairi ENSETEG00000019523 ortholog_one2one 2 retrogenes
retro_etel_2160, retro_etel_88,
Macaca mulatta ENSMMUG00000009838 ortholog_one2many 1 retrogene
retro_mmul_62,
Monodelphis domestica ENSMODG00000002466 ortholog_one2one 1 retrogene
retro_mdom_891,
Otolemur garnettii ENSOGAG00000013284 ortholog_one2one 1 retrogene
retro_ogar_1513,
Tupaia belangeri ENSTBEG00000008306 ortholog_one2one 1 retrogene
retro_tbel_4497,
Tursiops truncatus ENSTTRG00000000462 ortholog_one2one 1 retrogene
retro_ttru_328,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1296 87.96 71.11
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Download FASTA sequences of all ENSOCUG00000006455 retrocopies