Parental gene: | RAE1, ENSOCUG00000001585 |
| Aliases: | None |
| Description: | RAE1 RNA export 1 homolog (S. pombe) [Source:HGNC Symbol;Acc:9828] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL019257:9693..23581(-) |
>ENSOCUG00000001585
ATGAGTCTGTTTGGAACCACCTCGGGCTTTGGGACCAGCGGGACCAGCATGTTCGGCAGCACGACGACCGATAACCACAA
CCCCATGAAGGACATCGAGGTGACGTCTTCTCCCGACGACAGCGTGGGCTGCCTGTCCTTCAGCCCGCCGACCTTGCCGG
GGAACTTCCTCATCGCGGGGTCGTGGGCCAATGACGTCCGCTGCTGGGAGGTTCAGGACAGCGGGCAGACCATCCCGAAA
GCCCAGCAGATGCACACCGGGCCGGTCCTCGACGTCTGCTGGAGTGACGACGGGAGCAAAGTGTTCACCGCATCTTGTGA
TAAAACTGCCAAAATGTGGGACCTCAACAGCAATCAGGCAATTCAGATCGCACAGCACGATGCTCCTGTTAAAACCATAC
ACTGGATCAAAGCCCCCAACTACAGCTGCGTGATGACCGGGAGCTGGGACAAGACCCTGAAGTTCTGGGATACGCGGTCG
TCAAACCCTATGATGGTTCTGCAGCTCCCCGAGAGGTGTTACTGTGCGGACGTGATCTACCCGATGGCCGTGGTGGCGAC
CGCGGAGAGGGGCCTGATTGTGTACCAGCTGGAGAACCAGCCTTCCGAGTTCCGGAGGATAGAGTCCCCGCTGAAACACC
AGCATCGATGTGTGGCTATTTTTAAAGACAAACAGAACAAGCCAACTGGATTTGCTCTGGGCAGTATTGAGGGGCGAGTT
GCTATTCACTACATCAACCCTCCGAATCCTGCCAAAGACAACTTCACCTTTAAGTGTCATCGCTCCAACGGGACCAACAC
GTCAGCGCCTCAGGACATCTACGCGGTCAATGGCATCGCGTTCCATCCCGTTCACGGCACCCTGGCCACCGTGGGGTCTG
ACGGCCGCTTCAGCTTCTGGGACAAGGATGCCAGAACAAAACTCAAAACTTCAGAGCAGTTAGACCAGCCGATAGCAGCC
TGCGGCTTCAACCACAACGGCAACATCTTCGCCTACGCCTCCAGCTACGACTGGTCCAAGGTTGCCGAGGTCACCGGCTG
TGTCCTGCTCATCTCTGTACGTGCCCGCCTTCTGCCCACCTGCACGGAGTCCCTCGCTCGCTCTGCCCACGGGAGCCGGT
GA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 22 .79 RPM |
| SRP017611_kidney | 16 .83 RPM |
| SRP017611_liver | 8 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000014649 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000000228 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000000550 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000002438 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_646 | 94.55 | 54.89 | Please wait, loading  |
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| 2. | retro_ocun_1819 | 57.29 | 51.36 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000001585 retrocopies