Parental gene:

Ddx3x, ENSMUSG00000000787

Aliases:Ddx3x, D1Pas1-rs2, Ddx3, Fin14
Description:DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
Organism:Mouse (Mus musculus)
Coordinates:X:13280969..13294052(+)


>ENSMUSG00000000787
ATGAGTCATGTGGCAGTGGAAAATGCGCTCGGGCTGGACCAGCAGTTTGCTGGCCTAGACCTGAACTCTTCAGATAATCA
GAGTGGAGGAAGTACAGCAAGCAAAGGGCGTTATATCCCACCTCATTTAAGGAACAGAGAAGCTACTAAAGGATTCTATG
ACAAAGACAGTTCAGGGTGGAGTTCTAGTAAAGATAAGGATGCATACAGCAGTTTTGGATCACGGGGTGATTCAAGAGGG
AAGTCTAGCTTCTTTGGAGATCGTGGAAGTGGATCAAGGGGAAGGTTTGATGATCGTGGACGGGGAGACTATGATGGCAT
TGGTGGCCGTGGAGATAGAAGTGGCTTTGGCAAATTTGAAAGAGGTGGAAATAGTCGCTGGTGTGACAAATCAGATGAAG
ATGACTGGTCAAAGCCACTCCCACCAAGTGAACGATTGGAACAGGAACTCTTTTCTGGAGGCAATACTGGGATTAACTTT
GAGAAATATGATGACATTCCAGTCGAAGCAACAGGCAACAACTGTCCTCCACACATTGAAAGTTTCAGTGATGTCGAGAT
GGGAGAAATTATTATGGGAAACATTGAGCTTACTCGTTATACTCGCCCAACTCCAGTGCAGAAGCATGCTATTCCTATTA
TCAAAGAGAAAAGAGACTTGATGGCTTGTGCTCAAACAGGCTCTGGAAAAACTGCAGCATTTCTCTTGCCCATCTTGAGT
CAGATCTATGCTGATGGTCCAGGAGAAGCTCTGAGGGCTATGAAGGAAAATGGAAGATATGGCCGTCGTAAACAGTATCC
AATCTCTTTGGTACTGGCACCAACGAGAGAATTGGCAGTGCAGATCTATGAGGAAGCCAGAAAATTCTCATACCGATCTA
GAGTCCGTCCTTGCGTGGTTTATGGTGGTGCTGAAATTGGCCAGCAGATTCGAGACTTAGAACGTGGATGCCACTTGTTA
GTAGCCACTCCAGGACGTCTAGTGGATATGATGGAGAGAGGGAAGATCGGGTTAGACTTCTGCAAATACCTGGTGTTAGA
TGAAGCTGACCGGATGTTAGATATGGGGTTTGAACCTCAGATACGAAGAATAGTTGAACAAGACACTATGCCTCCAAAAG
GTGTCCGCCACACTATGATGTTTAGTGCTACTTTTCCTAAGGAAATACAGATGCTGGCCCGTGATTTCTTAGATGAGTAC
ATATTTCTGGCTGTAGGAAGAGTTGGGTCTACTTCAGAGAACATCACACAAAAAGTGGTTTGGGTGGAGGAGATAGACAA
AAGGTCATTTCTGCTTGACCTTCTAAATGCAACAGGCAAGGATTCCCTGACTCTAGTGTTTGTGGAGACCAAAAAGGGGG
CAGATTCGCTGGAGGATTTCTTATACCATGAAGGATATGCTTGTACCAGTATCCATGGAGACCGTTCTCAGAGAGATAGG
GAAGAGGCCCTTCACCAGTTCCGCTCAGGAAAAAGCCCAATTCTAGTGGCTACAGCAGTAGCAGCAAGAGGACTGGATAT
TTCAAATGTGAAGCATGTTATTAATTTTGACCTGCCTAGTGATATCGAAGAATATGTGCATCGCATAGGCCGTACAGGCC
GTGTGGGAAACCTTGGTCTTGCCACCTCATTCTTTAATGAAAGGAATATAAATATCACAAAGGATTTACTGGATCTTCTT
GTTGAAGCAAAACAAGAAGTGCCTTCTTGGTTAGAGAACATGGCTTTTGAACACCACTACAAGGGTAGCAGTCGTGGACG
TTCTAAGAGCAGTCGATTTAGTGGAGGGTTTGGTGCCAGAGACTACCGACAGAGTAGCGGTGCCAGCAGTTCCAGCTTCA
GCAGCAGCCGTGCAAGCAGCAGTCGAAGTGGTGGAGGTGGCCATGGCGGCAGTCGAGGATTTGGTGGAGGTGGCTACGGA
GGCTTTTACAACAGTGATGGATATGGAGGGAATTATAACTCCCAGGGGGTTGACTGGTGGGGTAACTGA

Library Parental gene expression (RPM)
SRP007412_brain 210 .69 RPM
SRP007412_cerebellum 222 .97 RPM
SRP007412_heart 218 .81 RPM
SRP007412_kidney 285 .76 RPM
SRP007412_liver 248 .10 RPM
SRP007412_testis 34 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000035907 ortholog_one2many 1 retrogene
retro_btau_1846,
Callithrix jacchus ENSCJAG00000009050 ortholog_many2many 2 retrogenes
retro_cjac_1428, retro_cjac_4062,
Cavia porcellus ENSCPOG00000013557 ortholog_one2many 2 retrogenes
retro_cpor_326, retro_cpor_53,
Equus caballus ENSECAG00000009901 ortholog_one2many 1 retrogene
retro_ecab_413,
Homo sapiens ENSG00000215301 ortholog_one2many 1 retrogene
retro_hsap_4709,
Macaca mulatta ENSMMUG00000017569 ortholog_one2many 2 retrogenes
retro_mmul_1898, retro_mmul_2504,
Ornithorhynchus anatinus ENSOANG00000011274 ortholog_one2many 1 retrogene
retro_oana_64,
Pongo abelii ENSPPYG00000020257 ortholog_one2many 1 retrogene
retro_pabe_3657,
Pan troglodytes ENSPTRG00000022488 possible_ortholog 1 retrogene
retro_ptro_3130,
Rattus norvegicus ENSRNOG00000023383 ortholog_one2one 1 retrogene
retro_rnor_1415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_205 94.12 100.00
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Download FASTA sequences of all ENSMUSG00000000787 retrocopies