Parental gene:

HMGN1, ENSMPUG00000008550

Aliases:None
Description:high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984]
Organism:Ferret (Mustela putorius furo)
Coordinates:GL896984.1:3211614..3216936(-)


>ENSMPUG00000008550
GGTTGCTGGGGGCCCGGGGGCGCTTCGCCCCTCACGCGTCGCTCTTTCTCCTTCTCTCCCCTAAAGCCCAAGAGGAGGTC
GGCGCGGCTGTCCGCGGTAAGTAGCGCGAGCCCCGCACCCCCGTCCTCTCCGCGCGGCCGTGCCCGCCGGACGCTCAGCG
CTGCCCTTGCCTTTCAGAAGCCCGCGCCCGCGAAAGTGGAAGCGAAGCCCAAGAAGGCGGCAGCAAAGGATAAATCTTCA
GACAAAAAAGTGCAAACAAAGGGGAAAAGAGGAGCAAAGGGAAAACAGGCTGAAGTGGCTAACCAAGAAGCAAAAGACGA
CTTACCTGCAGAAAACGGAGAAACTAAAAATGAGAGTCCAGCATCGGATGAAGCAGGAGAGAAAGAAGCCAAGTCTGATT
AG

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000002336 possible_ortholog 7 retrogenes
retro_cpor_1129, retro_cpor_1389, retro_cpor_334, retro_cpor_349, retro_cpor_4, retro_cpor_884, retro_cpor_949,
Monodelphis domestica ENSMODG00000020972 ortholog_one2many 5 retrogenes
retro_mdom_1085, retro_mdom_109, retro_mdom_284, retro_mdom_755, retro_mdom_88,
Rattus norvegicus ENSRNOG00000048226 possible_ortholog 8 retrogenes
retro_rnor_1020, retro_rnor_1239, retro_rnor_1290, retro_rnor_2643, retro_rnor_2667, retro_rnor_642, retro_rnor_764, retro_rnor_966,
Rattus norvegicus ENSRNOG00000050978 possible_ortholog 5 retrogenes
retro_rnor_1057, retro_rnor_1318, retro_rnor_1389, retro_rnor_2433, retro_rnor_358,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mputfur_252 51.43 75.94
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2. retro_mputfur_371 51.39 52.63
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3. retro_mputfur_483 52.94 51.13
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Download FASTA sequences of all ENSMPUG00000008550 retrocopies