Parental gene: | OGFOD1, ENSMODG00000013378 |
| Aliases: | None |
| Description: | 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:25585] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:447343690..447363668(+) |
>ENSMODG00000013378
ATGTCCAATCACAGCAAAGACGTTCGCACCATCAGAGGTGCCCATTGGCAAGGACAAATTAGGCTCCGCCTCCCCCCTCT
TTTCATTTTCCCATTGGGCGTCTCGTGGGCTGTGAGGGATTCTAGGAGTTGTAGTATCAGTGGGTGCGACGCATTTGCCG
CATGGCGCGCGACTTATAGTGGCCACTGTGTCTCGGAGGCGAGGGGATCCAAAGGTATGAGCGGGAAACGGCGCGCGGAT
CAGGGACCTGTCTCAGAAAGAAAGAAGAAGGGGAAGCGCGAATTGACAGGAGAGTTCTCTGCTACTCTCCGTGAGGAGAC
AGTGAAAAAGCAGGTGGCTGAGGCCTGGAGCCGGAGGACCAGGTTCAGTCATGAGGCCATAATTATGGACCCAGATCCTT
TCCAACACTGTGTGATCCCAAACTTCATCCAGTGCCAGACTTTCTTGGAAGGACTTCAGAAGGAACTTTTGGATCTGGAT
TTTCATGAGAAATGCAATGACTTGTACAAATTCAAACAGTCGGATGATCTGAAGAATAGAGACGAACTTCATATCTCTGC
TTTAAGGAAAGTTCTGTTTGAAGATTTCCGGAGATGGCTTTCAGACATTGTTTTGATTGACTTGGAATCAACTGTTGATA
TCTCTTGTGCTAAGTATGAATATACAGATATCCTGTTATGCCATGATGATGAGCTGGAAGGAAGAAGAATTGCTTTCATT
CTATATCTTGTTCCTGCTTGGGACAAGAGCCTTGGGGGTACCTTGGACTTGTACAGTACAGATGAACATGTCCAGCCAGA
ACAGATTGTTAAGTCTCTTGTCCCATCTTGGAACACCTTGGTTTTCTTTGAAGTGTCTCCAGTGTCCTACCATCAGGTTT
CTGAAGTTCTGTCTGAAGGAAAATGTCGGCTGTCTATAAGTGGCTGGTTTCATGGTCCTTCTCAGACAAGGTCCTCAAGC
TATTTCGAGCCCCTCTTACCGCGTAGCCCTCACATTTTACGAGATAATGAAATTTTATATGAATGGATTAATCCAATCTA
TATGGACATCGATTTCCAGGCTCAAATTCAAGAGGAATTTGAAGAGCGCTCTGAAATTCTATTGAAGGAGTTTTTCAAGT
CTGAAAAATATGAAAAAATATATGAGGCTTTGGAGAAAGAAGATCTAGAATGGAGCAAACGAGGTCCCCCCAATAAAAGG
TTTTATGAAACAGCTGAGGAAGAGAAGCTTCCAGATATCTTAAGGGAGTGCATGGAGTTATTTCGCTCTGAGGCCCTGTT
CTTGCTGCTGTCCAACTTCACAGGCCTAAAGCTTCATTTCCTAGTCTCTTCAGATGAGGATGATGAGAACCAGACAAACA
ATGATGAAGAAGAAAGTGAAGAAATTAGCCATGGTTCTTCTAAAGGAGAAAACTACCAGGAGGCCAGTGGCCACACAAGC
CAACAAAGCAAGATAGAAACAGCTCTAGAATCAGAGGATGGAGAGGCAAAGAATAAATCAACTGTCCCCACATGCACTGG
AGAGCTGAGATATTGGAAGAATGGTCACTACACTCTAGTGCATGACACAAAAAATACTGAATTTGCCTTAGACCTGCTTT
TCTACTGTGGCTGTAAAGGATGGAAAACAGAATATGGTGGCTTTACTTCCTACATTGCCAAAGATGAAGATGAAGAGCTC
CTAACAGTGACTCCAGAAGAGAATTCACTGGCATTGGTTTACAGAGATCGAGAAACTCTAAAATTCGTCAAGCATATCAA
CCACCAAAGCTTAGAGCGAAAGAAAACTGGCCAGAACAGAACAGGTTTTTGGGACTTTTCCTTTGTCTACTATGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 30 .99 RPM |
| SRP007412_cerebellum | 21 .22 RPM |
| SRP007412_heart | 44 .85 RPM |
| SRP007412_kidney | 42 .14 RPM |
| SRP007412_liver | 63 .44 RPM |
| SRP007412_testis | 36 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000014894 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000006697 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_777 | 89.86 | 91.83 | Please wait, loading  |
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Download FASTA sequences of all ENSMODG00000013378 retrocopies