Parental gene:

SRSF5, ENSMODG00000011362

Aliases:None
Description:serine/arginine-rich splicing factor 5 [Source:HGNC Symbol;Acc:10787]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:275452520..275456281(+)


>ENSMODG00000011362
ATGAGTGGCTGTAGAGTATTCATTGGAAGGCTAAATCCGGCAGCCCGAGAAAAAGATGTCGAAAGATTTTTTAAAGGATA
TGGACGAATAAGAGACATTGATCTGAAAAGAGGCTTTGGGTTTGTGGAATTTGAGGACCCGAGGGATGCTGATGATGCTG
TTTATGAACTTGATGGGAAGGAACTCTGCAGTGAAAGGGTTACAATTGAACATGCCAGGGCTCGTTCTCGAGGTGGGCGA
GGAAGAGGGCGATACTCTGATCGTTTTAGTAGCCGCCGTCCACGAAACGATAGGAGAAATGCCCCACCTGTACGAACAGA
AAATCGTCTTATAGTTGAGAATTTATCTTCCCGAGTCAGCTGGCAGGATCTCAAAGATTTCATGAGGCAAGCTGGGGAAG
TAACCTTTGCAGATGCTCATAGGCCTAAACTAAATGAAGGGGTGGTTGAGTTTGCCTCTTACAGTGACTTAAAGAATGCT
ATTGAAAAACTATCTGGAAAAGAAATAAATGGAAGGAAAATTAAACTGATTGAAGGCAGCAAAAGGCACAGTAGGTCGAG
AAGCCGATCACGGTCCCGCACTAGGAGCTCTTCTAGGTCACGGAGCCGGTCTCGTTCCCGAAGCCGCAAATCTTACAGCA
GGTCAAGAAGCCGAAGCCATAGCAAATCCAGATCTGTTAGTAGGTCACCTATGCCTGAGAAGAGCCAGAAACGAGGCTCT
TCAAGTAGATCTAAATCTCCAGCATCTGTGGATCGCCAGAGGTCCAGATCTAGATCTAGGTCTGTTGACAGTGGCAATTG
A

Library Parental gene expression (RPM)
SRP007412_brain 662 .97 RPM
SRP007412_cerebellum 788 .06 RPM
SRP007412_heart 369 .40 RPM
SRP007412_kidney 611 .01 RPM
SRP007412_liver 443 .57 RPM
SRP007412_testis 555 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000001521 ortholog_one2one 2 retrogenes
retro_meug_1173, retro_meug_2182,
Monodelphis domestica ENSMODG00000003107 within_species_paralog 1 retrogene
retro_mdom_697,
Monodelphis domestica ENSMODG00000008669 other_paralog 1 retrogene
retro_mdom_289,
Mus musculus ENSMUSG00000021134 ortholog_one2one 1 retrogene
retro_mmus_2396,
Rattus norvegicus ENSRNOG00000005513 ortholog_one2one 1 retrogene
retro_rnor_2900,
Tupaia belangeri ENSTBEG00000001972 ortholog_one2one 1 retrogene
retro_tbel_2707,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_934 62.94 62.78
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Download FASTA sequences of all ENSMODG00000011362 retrocopies