Parental gene: | PHTF1, ENSMODG00000000803 |
| Aliases: | None |
| Description: | putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:8939] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 2:484268995..484311741(-) |
>ENSMODG00000000803
ATGGACGCGAACGAGAGAGATGCCATTTCGTGGTACCAAAAGAAGATTGGAGCGTATGATCAGCAGATATGGGAAAAATC
CATTGAACAGACCCAGATAAAGGGCTTCAAAAACAAACCAAAAAAGACAGGTCACATAAAGCCCGACTTGATTGACGTCG
ACTTAATCCGAGGCTCTACATTTGCCAAAGCCAAACCTGAAATTCCATGGACATCACTAACTCGGAAGGGAATTGTTCGG
GTCATTTGTTTTCCATTGTTTAGCAAATGGTGGATTCAGGTCACCTCTTTTCGAATCTTTATTTGGCTGCTGCTGCTTTA
CCTCATGCAAGTTCTGTCATTTGTGTTGTATTTCATAATGCCTATTGTGAATATAAGTGAAGTGATTGGTCCAGTGTGCC
TTATGCTACTGATGGGAACTGTCCACTGTCAAATAGTCTCCACCCAGATGGCTAAACCTTCAGGAACAAATGGAAACCGG
AGGAGGAGAAAATTACGCAAAACTGTAAATGGTGATGGGAGCAGAGAATGTGGAAGTTATAACTGCTCTGATAAAGTCAG
AGGAGTAGAATCTTCGGAATCTGCATCCCTAAATGGTGGTTTTTGGGGGACTCTCTTTTGCAACAGTCGAACAAAAAGAG
TAAAATTATTAACTGACAAAGGAGTTGAAACTGACAATAATCCGACTATTTTGAATCTCAACCCAAAGAAAAAACATCCC
CGATCAGAGATGAGGATGTGGCAAGCAAGAGAGAAAGCAAAACTTTCAGATGGGGAAAAGAGTCACGAAGGTTATAGACG
TTTAGGAAACGGAATTTCAGATGAACTGTCAAGTGAAGATGACTGTGAAGAACAGACACAAATGATCCTGTTACGGAGAA
GTGTGGAAGGGGCCTCAAGTGACAATGGCTATGAAATCAAGAACGAAAAACCATCAGTTTCTTCAAAACATGCAAGCTCT
CAAGTAAAGAAAAATTCCACTTCAAGATGGTGTCGAATGGTCCGAGATTCAGATAGCCTGGCTGAATCAGAGCTTGAGTC
AGTTGCCTTTAGTCAGGAGTCTCGATCTGGTATCAGTGGTGGCTCTAGAAGCTGTAGTCGGAGGGACTCGGAAAGCACCC
GCCATGATTCAGAAACAGAGGACATGTTGTGGGATGACCTTTTGCATGGGCCTGAGTGCCGCTCATCAGCCACGAGTGAC
AGCGAGGAGGGGAATGTGAAGGCCCTGCCCCCAGGTGCCAAACGGGATCCAAAAGAGGATGTTTTCCAACAGAACCATTT
GTTCTGGCTACAGAATACAAGCCCTGCCTCTGAACGAGTGAGTGCAATCATTTGGGAAGGTAATGAATGTAAAAAAATGG
ATATGTCTGTTTTGGAAATCAGTGGCATCATCATGAGTAGGGTTAATGCATATCAGCAGGGTGCAGGTTATCAGATGCTG
GGAAATATCGTAACTATTGGGTTAGCATTTTTTCCATTCTTACATCGACTCTTCCATGAAAAGAATATGGACCAAATACG
ATCCATCTCGACTAATGAGATCCTGACTCTCTTTTGTGGGGCACCACCTTCGGTAGCGATCATCATTTTGTCAGCAGTCA
ATTTTCTTGAGCGCTTGTGTCTAACCTGGATGTTCTTTTTTATGATGTGTGTGGCAGAGAGGACATACAAACAGCGATTT
TTATTTGCAAAACTCTTTAGTCATATTACCTCTGCCAGGAAAGCTAGAAAATATGAAATCCCCCATTTCAGGCTCAAAAA
GGTGGAGAACATTAAGATATGGCTATCACTGCGTTCTTACTTAAAGAGACGGGGTCCACAGCGCTCAGTCGATGTGGTTG
TATCATCAGTATTCTTACTGACACTTTCGATTGCTTTTATTTGCTGTGCCCAGGTTCTCCAAGGCCATAAAACCTTTCTG
GATGATGCTTATAATTGGGAATTCCTGATTTGGGAGACAGCCCTGTTGCTCTTCTTATTGCGTCTTGCCTCCCTGGGGTC
CGAAACCAATAAGAAGTACAGTAATATTTCAGTACTGCTCACGGAGCAGATTAACTTATATCTCAAGATGGAAAAGAAGC
CAAATAAAAAAGAACAGCTCACCCTGGTGAACAACGTGCTAAAGCTGTCGACCAAATTACTAAAAGAATTGGACACACCA
TTTAGACTCTATGGCCTGACCATGAATCCCCTAATCTACAATATAACTCGAGTGGTTATCCTTTCAGCTGTCTCAGGGGT
TATAAGTGATCTCCTAGGATTTAACATAAGATTGTGGAAAATTAAGCCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sarcophilus harrisii | ENSSHAG00000011937 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1963 | 63.43 | 69.99 | Please wait, loading  |
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Download FASTA sequences of all ENSMODG00000000803 retrocopies