Parental gene:

HNRNPK, ENSGGOG00000015500

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:65871971..65884174(-)


>ENSGGOG00000015500
ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCCATCAAAGGACGTGCACAGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGTCGCGGACGCCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCTCCTCCTC
CCGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTC
ATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCCGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATGAGCCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 254 .83 RPM
SRP007412_cerebellum 240 .25 RPM
SRP007412_heart 89 .12 RPM
SRP007412_kidney 273 .55 RPM
SRP007412_liver 223 .10 RPM
SRP007412_testis 375 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010832 ortholog_one2one 2 retrogenes
retro_chof_1023, retro_chof_1589,
Dasypus novemcinctus ENSDNOG00000000026 possible_ortholog 4 retrogenes
retro_dnov_1433, retro_dnov_1820, retro_dnov_2316, retro_dnov_2638,
Dipodomys ordii ENSDORG00000016024 possible_ortholog 1 retrogene
retro_dord_673,
Gorilla gorilla ENSGGOG00000012613 other_paralog 2 retrogenes
retro_ggor_212, retro_ggor_2734,
Loxodonta africana ENSLAFG00000026567 possible_ortholog 1 retrogene
retro_lafr_809,
Macropus eugenii ENSMEUG00000006975 possible_ortholog 3 retrogenes
retro_meug_271, retro_meug_357, retro_meug_484,
Macaca mulatta ENSMMUG00000018871 ortholog_one2one 1 retrogene
retro_mmul_2111,
Monodelphis domestica ENSMODG00000008402 possible_ortholog 1 retrogene
retro_mdom_1666,
Nomascus leucogenys ENSNLEG00000003486 possible_ortholog 3 retrogenes
retro_nleu_1178, retro_nleu_1815, retro_nleu_973,
Otolemur garnettii ENSOGAG00000007478 possible_ortholog 3 retrogenes
retro_ogar_2635, retro_ogar_2966, retro_ogar_3086,
Sarcophilus harrisii ENSSHAG00000017109 possible_ortholog 1 retrogene
retro_shar_820,
Sus scrofa ENSSSCG00000022760 possible_ortholog 1 retrogene
retro_sscr_437,
Tarsius syrichta ENSTSYG00000001196 possible_ortholog 3 retrogenes
retro_tsyr_1664, retro_tsyr_1796, retro_tsyr_2149,
Tursiops truncatus ENSTTRG00000004906 possible_ortholog 1 retrogene
retro_ttru_1622,
Tursiops truncatus ENSTTRG00000016693 possible_ortholog 7 retrogenes
retro_ttru_1144, retro_ttru_180, retro_ttru_1922, retro_ttru_444, retro_ttru_813, retro_ttru_930, retro_ttru_937,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1764 88.07 98.92
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2. retro_ggor_1866 92.46 99.78
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Download FASTA sequences of all ENSGGOG00000015500 retrocopies