Parental gene:

GM2A, ENSG00000196743

Aliases:GM2A, GM2-AP, SAP-3
Description:GM2 ganglioside activator [Source:HGNC Symbol;Acc:4367]
Organism:Human (Homo sapiens)
Coordinates:5:150591710..150650001(+)


>ENSG00000196743
ATGCAGTCCCTGATGCAGGCTCCCCTCCTGATCGCCCTGGGCTTGCTTCTCGCGGCCCCTGCGCAAGCCCACCTGAAAAA
GCCATCCCAGCTCAGTAGCTTTTCCTGGGATAACTGTGATGAAGGGAAGGACCCTGCGGTGATCAGAAGCCTGACTCTGG
AGCCTGACCCCATCATCGTTCCTGGAAATGTGACCCTCAGTGTCATGGGCAGCACCAGTGTCCCCCTGAGTTCTCCTCTG
AAGGTGGATTTAGTTTTGGAGAAGGAGGTGGCTGGCCTCTGGATCAAGATCCCATGCACAGACTACATTGGCAGCTGTAC
CTTTGAACACTTCTGTGATGTGCTTGACATGTTAATTCCTACTGGGGAGCCCTGCCCAGAGCCCCTGCGTACCTATGGGC
TTCCTTGCCACTGTCCCTTCAAAGAAGGAACCTACTCACTGCCCAAGAGCGAATTCGTTGTGCCTGACCTGGAGCTGCCC
AGTTGGCTCACCACCGGGAACTACCGCATAGAGAGCGTCCTGAGCAGCAGTGGGAAGCGTCTGGGCTGCATCAAGATCGC
TGCCTCTCTAAAGGGCATATAA

Library Parental gene expression (RPM)
bodymap2_adipose 46 .93 RPM
bodymap2_adrenal 65 .79 RPM
bodymap2_brain 81 .67 RPM
bodymap2_breast 116 .89 RPM
bodymap2_colon 40 .26 RPM
bodymap2_heart 52 .95 RPM
bodymap2_kidney 27 .96 RPM
bodymap2_liver 26 .19 RPM
bodymap2_lung 64 .01 RPM
bodymap2_lymph_node 60 .07 RPM
bodymap2_ovary 62 .65 RPM
bodymap2_prostate 71 .84 RPM
bodymap2_skeletal_muscle 12 .57 RPM
bodymap2_testis 49 .89 RPM
bodymap2_thyroid 30 .34 RPM
bodymap2_white_blood_cells 116 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000020587 ortholog_one2one 1 retrogene
retro_ecab_510,
Gorilla gorilla ENSGGOG00000015302 ortholog_one2one 2 retrogenes
retro_ggor_1891, retro_ggor_313,
Macropus eugenii ENSMEUG00000010421 ortholog_one2one 1 retrogene
retro_meug_1818,
Microcebus murinus ENSMICG00000000690 ortholog_one2one 1 retrogene
retro_mmur_518,
Myotis lucifugus ENSMLUG00000003215 ortholog_one2one 1 retrogene
retro_mluc_920,
Macaca mulatta ENSMMUG00000022869 ortholog_one2one 1 retrogene
retro_mmul_454,
Nomascus leucogenys ENSNLEG00000010966 ortholog_one2one 1 retrogene
retro_nleu_866,
Oryctolagus cuniculus ENSOCUG00000015837 ortholog_one2many 1 retrogene
retro_ocun_704,
Ochotona princeps ENSOPRG00000006171 ortholog_one2one 1 retrogene
retro_opri_1169,
Pongo abelii ENSPPYG00000015962 ortholog_one2one 1 retrogene
retro_pabe_403,
Pan troglodytes ENSPTRG00000017431 ortholog_one2one 2 retrogenes
retro_ptro_1834, retro_ptro_221,
Ictidomys tridecemlineatus ENSSTOG00000028500 ortholog_one2one 1 retrogene
retro_itri_759,
Tursiops truncatus ENSTTRG00000000503 ortholog_one2one 1 retrogene
retro_ttru_488,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_264 65.97 72.02
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_2715 73.79 52.85
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000196743 retrocopies