Parental gene:

SH3GL1, ENSG00000141985

Aliases:SH3GL1, CNSA1, EEN, SH3D2B, SH3P8
Description:SH3-domain GRB2-like 1 [Source:HGNC Symbol;Acc:10830]
Organism:Human (Homo sapiens)
Coordinates:19:4360366..4400544(-)


>ENSG00000141985
ATGTCGGTGGCGGGGCTGAAGAAGCAGTTCTACAAGGCGAGCCAGCTGGTCAGTGAGAAGGTCGGAGGGGCCGAGGGGAC
CAAGCTGGATGATGACTTCAAAGAGATGGAGAAGAAGGTGGATGTCACCAGCAAGGCGGTGACAGAAGTGCTGGCCAGGA
CCATCGAGTACCTGCAGCCCAACCCAGCCTCGCGGGCTAAGCTGACCATGCTCAACACGGTGTCCAAGATCCGGGGCCAG
GTGAAGAACCCCGGCTACCCGCAGTCGGAGGGGCTTCTGGGCGAGTGCATGATCCGCCACGGGAAGGAGCTGGGCGGCGA
GTCCAACTTTGGTGACGCATTGCTGGATGCCGGCGAGTCCATGAAGCGCCTGGCAGAGGTGAAGGACTCCCTGGACATCG
AGGTCAAGCAGAACTTCATTGACCCCCTCCAGAACCTGTGCGAGAAAGACCTGAAGGAGATCCAGCACCACCTGAAGAAA
CTGGAGGGCCGCCGCCTGGACTTTGACTACAAGAAGAAGCGGCAGGGCAAGATCCCCGATGAGGAGCTACGCCAGGCGCT
GGAGAAGTTCGAGGAGTCCAAGGAGGTGGCAGAAACCAGCATGCACAACCTCCTGGAGACTGACATCGAGCAGGTGAGTC
AGCTCTCGGCCCTGGTGGATGCACAGCTGGACTACCACCGGCAGGCCGTGCAGATCCTGGACGAGCTGGCGGAGAAGCTC
AAGCGCAGGATGCGGGAAGCTTCCTCACGCCCTAAGCGGGAGTATAAGCCCAAGCCCCGGGAGCCCTTTGACCTTGGAGA
GCCTGAGCAGTCCAACGGGGGCTTCCCCTGCACCACAGCCCCCAAGATCGCAGCTTCATCGTCTTTCCGATCTTCCGACA
AGCCCATCCGGACCCCTAGCCGGAGCATGCCGCCCCTGGACCAGCCGAGCTGCAAGGCGCTGTACGACTTCGAGCCCGAG
AACGACGGGGAGCTGGGCTTCCATGAGGGCGACGTCATCACGCTGACCAACCAGATCGATGAGAACTGGTACGAGGGCAT
GCTGGACGGCCAGTCGGGCTTCTTCCCGCTCAGCTACGTGGAGGTGCTTGTGCCCCTGCCGCAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 61 .30 RPM
bodymap2_adrenal 44 .54 RPM
bodymap2_brain 14 .81 RPM
bodymap2_breast 32 .30 RPM
bodymap2_colon 39 .72 RPM
bodymap2_heart 7 .38 RPM
bodymap2_kidney 19 .61 RPM
bodymap2_liver 12 .63 RPM
bodymap2_lung 33 .98 RPM
bodymap2_lymph_node 28 .95 RPM
bodymap2_ovary 59 .89 RPM
bodymap2_prostate 36 .20 RPM
bodymap2_skeletal_muscle 12 .70 RPM
bodymap2_testis 41 .36 RPM
bodymap2_thyroid 31 .96 RPM
bodymap2_white_blood_cells 20 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000008198 ortholog_one2one 3 retrogenes
retro_ggor_2151, retro_ggor_2258, retro_ggor_675,
Macaca mulatta ENSMMUG00000000273 possible_ortholog 1 retrogene
retro_mmul_1264,
Monodelphis domestica ENSMODG00000000931 ortholog_one2one 1 retrogene
retro_mdom_1530,
Nomascus leucogenys ENSNLEG00000003122 ortholog_one2one 2 retrogenes
retro_nleu_2914, retro_nleu_3075,
Pongo abelii ENSPPYG00000009405 ortholog_one2one 6 retrogenes
retro_pabe_1488, retro_pabe_1516, retro_pabe_1530, retro_pabe_1542, retro_pabe_1700, retro_pabe_3542,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1742 84.04 90.22
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2. retro_hsap_1745 84.94 90.22
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3. retro_hsap_1859 85.33 99.73
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Download FASTA sequences of all ENSG00000141985 retrocopies