Parental gene: | RPS2, ENSG00000140988 |
| Aliases: | RPS2, LLREP3, S2 |
| Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 16:2012052..2014861(-) |
>ENSG00000140988
ATGGCGGATGACGCCGGTGCAGCGGGGGGGCCCGGGGGCCCTGGTGGCCCTGGGATGGGGAACCGCGGTGGCTTCCGCGG
AGGTTTCGGCAGTGGCATCCGGGGCCGGGGTCGCGGCCGTGGACGGGGCCGGGGCCGAGGCCGCGGAGCTCGCGGAGGCA
AGGCCGAGGATAAGGAGTGGATGCCCGTCACCAAGTTGGGCCGCTTGGTCAAGGACATGAAGATCAAGTCCCTGGAGGAG
ATCTATCTCTTCTCCCTGCCTATTAAGGAATCAGAGATCATTGATTTCTTCCTGGGGGCCTCTCTCAAGGATGAGGTTTT
GAAGATTATGCCAGTGCAGAAGCAGACCCGTGCCGGCCAGCGCACCAGGTTCAAGGCATTTGTTGCTATCGGGGACTACA
ATGGCCACGTCGGTCTGGGTGTTAAGTGCTCCAAGGAGGTGGCCACCGCCATCCGTGGGGCCATCATCCTGGCCAAGCTC
TCCATCGTCCCCGTGCGCAGAGGCTACTGGGGGAACAAGATCGGCAAGCCCCACACTGTCCCTTGCAAGGTGACAGGCCG
CTGCGGCTCTGTGCTGGTACGCCTCATCCCTGCACCCAGGGGCACTGGCATCGTCTCCGCACCTGTGCCTAAGAAGCTGC
TCATGATGGCTGGTATCGATGACTGCTACACCTCAGCCCGGGGCTGCACTGCCACCCTGGGCAACTTCGCCAAGGCCACC
TTTGATGCCATTTCTAAGACCTACAGCTACCTGACCCCCGACCTCTGGAAGGAGACTGTATTCACCAAGTCTCCCTATCA
GGAGTTCACTGACCACCTCGTCAAGACCCACACCAGAGTCTCCGTGCAGCGGACTCAGGCTCCAGCTGTGGCTACAACAT
AG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 496 .47 RPM |
| bodymap2_adrenal | 505 .10 RPM |
| bodymap2_brain | 53 .79 RPM |
| bodymap2_breast | 261 .89 RPM |
| bodymap2_colon | 444 .16 RPM |
| bodymap2_heart | 116 .21 RPM |
| bodymap2_kidney | 179 .65 RPM |
| bodymap2_liver | 249 .89 RPM |
| bodymap2_lung | 464 .79 RPM |
| bodymap2_lymph_node | 651 .42 RPM |
| bodymap2_ovary | 445 .62 RPM |
| bodymap2_prostate | 603 .00 RPM |
| bodymap2_skeletal_muscle | 731 .68 RPM |
| bodymap2_testis | 238 .89 RPM |
| bodymap2_thyroid | 257 .52 RPM |
| bodymap2_white_blood_cells | 782 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000002549 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000029191 | ortholog_one2one | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000016077 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010098 | ortholog_one2one | 19 retrogenes |
retro_ogar_1051, retro_ogar_1120, retro_ogar_1205, retro_ogar_1557, retro_ogar_1821, retro_ogar_1835, retro_ogar_1837, retro_ogar_1851, retro_ogar_2101, retro_ogar_2164, retro_ogar_2313, retro_ogar_2648, retro_ogar_2817, retro_ogar_2842, retro_ogar_2965, retro_ogar_3109, retro_ogar_3177, retro_ogar_3180, retro_ogar_794,
|
| Sarcophilus harrisii | ENSSHAG00000015213 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_136 | 71.24 | 75.77 | Please wait, loading  |
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| 2. | retro_hsap_140 | 73.08 | 53.24 | Please wait, loading |
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| 3. | retro_hsap_141 | 91.58 | 97.27 | Please wait, loading |
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| 4. | retro_hsap_148 | 89.08 | 100.00 | Please wait, loading |
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| 5. | retro_hsap_244 | 95.10 | 69.62 | Please wait, loading |
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| 6. | retro_hsap_250 | 85.52 | 98.29 | Please wait, loading |
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| 7. | retro_hsap_282 | 87.67 | 74.40 | Please wait, loading |
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| 8. | retro_hsap_385 | 94.64 | 95.56 | Please wait, loading |
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| 9. | retro_hsap_435 | 67.60 | 58.70 | Please wait, loading |
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| 10. | retro_hsap_754 | 93.10 | 98.98 | Please wait, loading |
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| 11. | retro_hsap_761 | 73.81 | 99.32 | Please wait, loading |
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| 12. | retro_hsap_970 | 80.61 | 100.00 | Please wait, loading |
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| 13. | retro_hsap_1060 | 93.17 | 100.00 | Please wait, loading |
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| 14. | retro_hsap_1443 | 90.14 | 100.00 | Please wait, loading |
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| 15. | retro_hsap_1444 | 55.35 | 71.67 | Please wait, loading |
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| 16. | retro_hsap_1457 | 59.85 | 88.40 | Please wait, loading |
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| 17. | retro_hsap_1463 | 94.68 | 96.25 | Please wait, loading |
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| 18. | retro_hsap_1648 | 66.67 | 99.66 | Please wait, loading |
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| 19. | retro_hsap_1688 | 75.97 | 87.71 | Please wait, loading |
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| 20. | retro_hsap_1722 | 77.37 | 64.85 | Please wait, loading |
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| 21. | retro_hsap_1812 | 97.96 | 100.00 | Please wait, loading |
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| 22. | retro_hsap_1830 | 87.70 | 83.28 | Please wait, loading |
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| 23. | retro_hsap_1831 | 79.78 | 92.15 | Please wait, loading |
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| 24. | retro_hsap_1838 | 86.19 | 90.78 | Please wait, loading |
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| 25. | retro_hsap_1845 | 93.33 | 97.27 | Please wait, loading |
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| 26. | retro_hsap_1897 | 80.73 | 100.00 | Please wait, loading |
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| 27. | retro_hsap_1953 | 79.72 | 72.01 | Please wait, loading |
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| 28. | retro_hsap_1965 | 85.97 | 94.88 | Please wait, loading |
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| 29. | retro_hsap_1971 | 85.05 | 94.88 | Please wait, loading |
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| 30. | retro_hsap_2124 | 95.93 | 100.00 | Please wait, loading |
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| 31. | retro_hsap_2198 | 84.11 | 77.44 | Please wait, loading |
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| 32. | retro_hsap_2424 | 78.49 | 93.86 | Please wait, loading |
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| 33. | retro_hsap_2483 | 92.49 | 100.00 | Please wait, loading |
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| 34. | retro_hsap_2486 | 78.18 | 74.06 | Please wait, loading |
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| 35. | retro_hsap_2871 | 68.10 | 82.56 | Please wait, loading |
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| 36. | retro_hsap_3035 | 87.92 | 70.31 | Please wait, loading |
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| 37. | retro_hsap_3097 | 89.97 | 96.93 | Please wait, loading |
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| 38. | retro_hsap_3106 | 91.34 | 94.20 | Please wait, loading |
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| 39. | retro_hsap_3182 | 76.19 | 99.66 | Please wait, loading |
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| 40. | retro_hsap_3211 | 56.19 | 68.26 | Please wait, loading |
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| 41. | retro_hsap_3369 | 80.63 | 85.67 | Please wait, loading |
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| 42. | retro_hsap_3464 | 87.69 | 88.05 | Please wait, loading |
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| 43. | retro_hsap_3584 | 95.22 | 100.00 | Please wait, loading |
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| 44. | retro_hsap_3779 | 87.88 | 100.00 | Please wait, loading |
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| 45. | retro_hsap_4094 | 84.31 | 86.35 | Please wait, loading |
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| 46. | retro_hsap_4290 | 93.03 | 83.28 | Please wait, loading |
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| 47. | retro_hsap_4811 | 92.52 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSG00000140988 retrocopies