Parental gene:

SPPL2A, ENSG00000138600

Aliases:SPPL2A, IMP3, PSL2
Description:signal peptide peptidase like 2A [Source:HGNC Symbol;Acc:30227]
Organism:Human (Homo sapiens)
Coordinates:15:50999505..51058005(-)


>ENSG00000138600
ATGGGGCCGCAGCGGCGGCTGTCCCCTGCCGGGGCCGCCCTACTCTGGGGCTTCCTGCTCCAGCTGACAGCCGCTCAGGA
AGCAATCTTGCATGCGTCTGGAAATGGCACAACCAAGGACTACTGCATGCTTTATAACCCTTATTGGACAGCTCTTCCAA
GTACCCTAGAAAATGCAACTTCCATTAGTTTGATGAATCTGACTTCCACACCACTATGCAACCTTTCTGATATTCCTCCT
GTTGGCATAAAGAGCAAAGCAGTTGTGGTTCCATGGGGAAGCTGCCATTTTCTTGAAAAAGCCAGAATTGCACAGAAAGG
AGGTGCTGAAGCAATGTTAGTTGTCAATAACAGTGTCCTATTTCCTCCCTCAGGTAACAGATCTGAATTTCCTGATGTGA
AAATACTGATTGCATTTATAAGCTACAAAGACTTTAGAGATATGAACCAGACTCTAGGAGATAACATTACTGTGAAAATG
TATTCTCCATCGTGGCCTAACTTTGATTATACTATGGTGGTTATTTTTGTAATTGCGGTGTTCACTGTGGCATTAGGTGG
ATACTGGAGTGGACTAGTTGAATTGGAAAACTTGAAAGCAGTGACAACTGAAGATAGAGAAATGAGGAAAAAGAAGGAAG
AATATTTAACTTTTAGTCCTCTTACAGTTGTAATATTTGTGGTCATCTGCTGTGTTATGATGGTCTTACTTTATTTCTTC
TACAAATGGTTGGTTTATGTTATGATAGCAATTTTCTGCATAGCATCAGCAATGAGTCTGTACAACTGTCTTGCTGCACT
AATTCATAAGATACCATATGGACAATGCACGATTGCATGTCGTGGCAAAAACATGGAAGTGAGACTTATTTTTCTCTCTG
GACTGTGCATAGCAGTAGCTGTTGTTTGGGCTGTGTTTCGAAATGAAGACAGGTGGGCTTGGATTTTACAGGATATCTTG
GGGATTGCTTTCTGTCTGAATTTAATTAAAACACTGAAGTTGCCCAACTTCAAGTCATGTGTGATACTTCTAGGCCTTCT
CCTCCTCTATGATGTATTTTTTGTTTTCATAACACCATTCATCACAAAGAATGGTGAGAGTATCATGGTTGAACTCGCAG
CTGGACCTTTTGGAAATAATGAAAAGTTGCCAGTAGTCATCAGAGTACCAAAACTGATCTATTTCTCAGTAATGAGTGTG
TGCCTCATGCCTGTTTCAATATTGGGTTTTGGAGACATTATTGTACCAGGCCTGTTGATTGCATACTGTAGAAGATTTGA
TGTTCAGACTGGTTCTTCTTACATATACTATGTTTCGTCTACAGTTGCCTATGCTATTGGCATGATACTTACATTTGTTG
TTCTGGTGCTGATGAAAAAGGGGCAACCTGCTCTCCTCTATTTAGTACCTTGCACACTTATTACTGCCTCAGTTGTTGCC
TGGAGACGTAAGGAAATGAAAAAGTTCTGGAAAGGTAACAGCTATCAGATGATGGACCATTTGGATTGTGCAACAAATGA
AGAAAACCCTGTGATATCTGGTGAACAGATTGTCCAGCAATAA

Library Parental gene expression (RPM)
bodymap2_adipose 56 .93 RPM
bodymap2_adrenal 60 .45 RPM
bodymap2_brain 15 .45 RPM
bodymap2_breast 60 .16 RPM
bodymap2_colon 34 .98 RPM
bodymap2_heart 57 .41 RPM
bodymap2_kidney 72 .73 RPM
bodymap2_liver 49 .39 RPM
bodymap2_lung 45 .38 RPM
bodymap2_lymph_node 28 .93 RPM
bodymap2_ovary 38 .65 RPM
bodymap2_prostate 32 .72 RPM
bodymap2_skeletal_muscle 158 .58 RPM
bodymap2_testis 34 .88 RPM
bodymap2_thyroid 74 .76 RPM
bodymap2_white_blood_cells 63 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000008946 ortholog_one2one 1 retrogene
retro_dord_754,
Homo sapiens ENSG00000157837 within_species_paralog 1 retrogene
retro_hsap_1898,
Gorilla gorilla ENSGGOG00000013154 ortholog_one2one 1 retrogene
retro_ggor_1191,
Pongo abelii ENSPPYG00000006472 ortholog_one2one 1 retrogene
retro_pabe_1293,
Pan troglodytes ENSPTRG00000007070 ortholog_one2one 1 retrogene
retro_ptro_1054,
Rattus norvegicus ENSRNOG00000011652 ortholog_one2one 1 retrogene
retro_rnor_1750,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1566 88.89 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000138600 retrocopies