Parental gene: | LAMTOR5, ENSFCAG00000023792 |
| Aliases: | None |
| Description: | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:HGNC Symbol;Acc:17955] |
| Organism: | Cat (Felis catus) |
| Coordinates: | C1:92983380..92987863(-) |
>ENSFCAG00000023792
ATGGAGGCCACCTTGGAGCAGCACTTGGAGGACACAATGAAGAATCCATCCATTGTTGGAGTCCTGTGCACAGATTCACA
AGGACTTAACCTGGGCTGCCGTGGGACCCTGTCAGATGAGCACGCTGGGGTGATATCTGTTCTAGCCCAGCAAGCAGCCA
AGCTAACCTCAGACCCCACTGATATTCCTGTGGTGTGTCTAGAGTCAGATAATGGGAACATTATGATCCAGAAACATGAC
AGCATCACGGTGGCAGTGCACAAGATGGCCTCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 15 .84 RPM |
| SRP017611_kidney | 31 .43 RPM |
| SRP017611_liver | 11 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011504 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000014970 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015023 | possible_ortholog | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000006807 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003401 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_413 | 72.04 | 100.00 | Please wait, loading  |
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| 2. | retro_fcat_478 | 83.56 | 78.02 | Please wait, loading |
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| 3. | retro_fcat_1718 | 86.96 | 100.00 | Please wait, loading |
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| 4. | retro_fcat_1853 | 80.46 | 95.60 | Please wait, loading |
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| 5. | retro_fcat_1887 | 84.44 | 96.70 | Please wait, loading |
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Download FASTA sequences of all ENSFCAG00000023792 retrocopies