Parental gene:

ENSFCAG00000015397

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:X:81540875..81542881(+)


>ENSFCAG00000015397
CTAGTCGAGTGTTGTGTGCTAGCGAGGAATCTTGAGAGTCGAGCTCTCATGGTGAACGTTCCTAAAACCCGCCGGACTTT
CTGCAAGAAGTGTGGCAAGCACCAACCCCACAAAGTGACACAGTACAAGAAAGGCAAAGATTCTCTTTATGCCCAGGGAA
AGCGGCGTTATGACAGGAAGCAGAGTGGCTATGGTGGGCAAACTAAGCCGATTTTCCGGAAAAAGGCTAAAACCACAAAG
AAGATTGTTCTGAGGCTTGAATGTGTTGAGCCCAACTGCAGATCTAAGAGAATGCTGGCTATTAAGAGATGCAAGCATTT
TGAACTGGGAGGAGATAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTAA

Library Parental gene expression (RPM)
SRP017611_brain 64 .73 RPM
SRP017611_kidney 367 .61 RPM
SRP017611_liver 146 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008503 possible_ortholog 1 retrogene
retro_acar_98,
Dasypus novemcinctus ENSDNOG00000015954 possible_ortholog 23 retrogenes
retro_dnov_1206, retro_dnov_1266, retro_dnov_1320, retro_dnov_1328, retro_dnov_1330, retro_dnov_1392, retro_dnov_1427, retro_dnov_1525, retro_dnov_1799, retro_dnov_1898, retro_dnov_227, retro_dnov_2302, retro_dnov_233, retro_dnov_2371, retro_dnov_243, retro_dnov_2488, retro_dnov_2503, retro_dnov_2587, retro_dnov_310, retro_dnov_596, retro_dnov_699, retro_dnov_871, retro_dnov_936,
Equus caballus ENSECAG00000015464 possible_ortholog 9 retrogenes
retro_ecab_129, retro_ecab_131, retro_ecab_204, retro_ecab_219, retro_ecab_265, retro_ecab_268, retro_ecab_294, retro_ecab_543, retro_ecab_646,
Gorilla gorilla ENSGGOG00000009460 ortholog_many2many 6 retrogenes
retro_ggor_13, retro_ggor_152, retro_ggor_207, retro_ggor_208, retro_ggor_42, retro_ggor_5,
Monodelphis domestica ENSMODG00000025578 possible_ortholog 2 retrogenes
retro_mdom_1878, retro_mdom_971,
Pteropus vampyrus ENSPVAG00000001569 possible_ortholog 1 retrogene
retro_pvam_17,
Rattus norvegicus ENSRNOG00000011494 possible_ortholog 1 retrogene
retro_rnor_259,
Sorex araneus ENSSARG00000014178 possible_ortholog 4 retrogenes
retro_sara_146, retro_sara_488, retro_sara_617, retro_sara_76,
Sarcophilus harrisii ENSSHAG00000013479 possible_ortholog 1 retrogene
retro_shar_467,
Tursiops truncatus ENSTTRG00000012779 possible_ortholog 1 retrogene
retro_ttru_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_25 86.79 86.89
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2. retro_fcat_80 100.00 86.89
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3. retro_fcat_106 80.00 81.97
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Download FASTA sequences of all ENSFCAG00000015397 retrocopies