Parental gene:

ENSEEUG00000008272

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_6683:186339..235371(+)


>ENSEEUG00000008272
ATGGCGGCCACCGAGGGGGTCGCGCAGGGGAGCGAGCCGGGTCAGTCGGAGCCACCACCTCCCCAGCCACACCCCCCACC
CGCTGTGCAACAGCAGGAAGAGGAGATGGCGGAGGCCAGAGAGGTGGTGGCGTCCCCTATGGACGATGGGTTTCTGAGCC
TGGACTCCCCCACCTACGTGCTGTACAGAGACAGGGCAGAATGGGCTGATATAGATCCAGTGCCACAGAATGATGGCCCC
AACCCAGTGGTCCAGATCATTTATAGTGAAAAATTTAGAGATGTTTATGATTATTTCCGGGCTGTTCTACAGCGTGATGA
AAGAAGTGAACGAGCTTTTAAACTAACCAGAGATGCTATTGAGTTAAATGCAGCCAATTATACAGTGTGGCATTTTCGGA
GAGTTCTTCTAAAGTCACTTCAAAAGGATCTATATGAAGAATTGAACTATATCACTGCAATAATTGAGGAACAGCCAAAA
AACTATCAAGTTTGGCATCATAGGCGAGTATTAGTTGAGTGGCTGAAAGATCCATCTCAGGAGCTTGAGTTTATCGCTGA
TATTCTTAATCAGGACGCAAAGAACTACCATGCCTGGCAGCATCGGCAGTGGGTTATTCAGGAATTTAAACTTTGGAATA
ATGAGCTTCATTATGTAGACCTACTTCTCAGAGAGGATGTGAGAAATAACTCTGTTTGGAACCAAAGATACTTTGTAATT
TCTAACACCACTGGCTACAATGATCCTGCTATATTGGAAAGAGAAGTCCAGTACACTCTGGAAAGGATCAAACTAGTACC
ACATAATGAAAGTGCATGGAACTATCTGAAAGGGATTTTACAAGACCTTGGTCTTTCCAAATATCCCAATTTGTTAAATC
AGTTACTTGACTTACAACCAAGTCACAGTTCCCCCTACCTAATTGCCTTTCTTGTGGATATCTATGAAGACATGCTAGAA
AACCAATGTGAGGACAAGGAGGACATTCTGAATAAAGCACTAGAGTTATGTGAAATCCTAGCTAAAGAAAAGGACACTAT
AAGAAAGGAATATTGGAGATACATTGGGAGATCTCTTCAGAGCAAACACAGCACAGAAAATGACCCAGCAACAAATGTAC
AGCAATAA

Library Parental gene expression (RPM)
SRP017611_brain 31 .91 RPM
SRP017611_kidney 63 .01 RPM
SRP017611_liver 36 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000168522 ortholog_one2many 1 retrogene
retro_hsap_805,
Loxodonta africana ENSLAFG00000000631 ortholog_one2one 1 retrogene
retro_lafr_506,
Monodelphis domestica ENSMODG00000010003 ortholog_one2one 1 retrogene
retro_mdom_1656,
Nomascus leucogenys ENSNLEG00000012979 possible_ortholog 1 retrogene
retro_nleu_2408,
Sorex araneus ENSSARG00000009660 ortholog_one2one 1 retrogene
retro_sara_109,
Ictidomys tridecemlineatus ENSSTOG00000011626 ortholog_one2one 1 retrogene
retro_itri_1221,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_532 80.27 96.53
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Download FASTA sequences of all ENSEEUG00000008272 retrocopies