Parental gene:

CENPK, ENSEEUG00000005831

Aliases:None
Description:centromere protein K [Source:HGNC Symbol;Acc:29479]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_3079:11789..40043(-)


>ENSEEUG00000005831
ATGAGTCAACAACATCTAGATCAACAAGATCTAGATCCAGATAGTACTACAGAAGTGGAAAATAATCAAAATGCTGAAGA
AGAACTTTTTAAAGAATGTGAAGAGATGTGGAAAGATATGGAAGAATGTCAGAATAAATTATCTCTTGTTGGAACTGAGA
CCCTTACTGATTCAAATGCTCAGCTATCATTACTAATTATGCAAGCAAAATGCTTGACTGCTGAGCTCAGTCAATGGCAG
AACGAAACTCCTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCACAAAATTGAAACA
TGATCTTGAACTGGTGCTATCTACTGTTCAATCAAAGAATGAAAAGTTAAAGGAAGACCTGGAAAGGGAGCAGCAGTGGT
TACGTGAACAGCAGCAGATAATGGAATCTCTTAATGCACTACATAACAAAATGAAAGAGCAGATTGTGACCTTTTCTGAG
TCAAGAGTCATCAGTGAACTTAAAACTAAGTTGCATGATATAAAAGAATATAGAAAGAAACTCTTAATTACCATGGGTGA
ATTTCTAGAAGACCATTTTCCTTTGCCTGACAGAAATGCTAAAAAGAAAAAGAAAAACAAAGAAACAACTGAACATCTGA
TAACACTGCATGAGATTTTGGAGATTCTTTTAAATAGACTGTTTGATGTTCCACATGACCCATATGTCAAAATTAGAGAT
TCTTTTTGGCCACCTTATATTGAACTGCTCTTACGTAATGGAATTGCCTTGAGACATCCAGAAGATCCAACCAGAATAAG
ATTAGAAGCTTTCCATCAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 3 .71 RPM
SRP017611_kidney 3 .00 RPM
SRP017611_liver 0 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013993 ortholog_one2one 1 retrogene
retro_chof_1252,
Dipodomys ordii ENSDORG00000007357 ortholog_one2one 1 retrogene
retro_dord_787,
Equus caballus ENSECAG00000019165 ortholog_one2one 1 retrogene
retro_ecab_181,
Monodelphis domestica ENSMODG00000019645 ortholog_one2one 1 retrogene
retro_mdom_1446,
Oryctolagus cuniculus ENSOCUG00000011568 ortholog_one2many 2 retrogenes
retro_ocun_1199, retro_ocun_74,
Tursiops truncatus ENSTTRG00000006527 ortholog_one2one 1 retrogene
retro_ttru_1310,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_81 89.23 95.24
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Download FASTA sequences of all ENSEEUG00000005831 retrocopies