Parental gene:

AZIN1, ENSECAG00000016922

Aliases:None
Description:antizyme inhibitor 1 [Source:HGNC Symbol;Acc:16432]
Organism:Horse (Equus caballus)
Coordinates:9:48300591..48313371(-)


>ENSECAG00000016922
ATGAAAGGATTTATTGACGATGCAAACTACTCCGTTGGCCTGTTGGATGAAGGAACAAACCTTGGAAATGTTATTGATAA
CTATGTTTGTGAACATACCCTGACAGGGAAAAATGCATTTTTTGTGGGAGATCTTGGAAAGATTGTGAAGAAACACAGTC
AGTGGCAGAATATAGTGGCTCAGATAAAGCCATTCTACACGGTAAAGTGCAACTCCGCTCCAGCTGTACTTGAGATTTTG
GCAGCTCTTGGAACTGGATTTGCTTGTTCCACTAAAAGTGAAATGGCTTTAGTGCAAGAATTGGGTGTATCTCCAGAAAA
CATCATTTACATAAGTCCTTGCAAACAAGTGTCTCAAATAAAGTATGCAGCAAAAGTTGGAGTGAATATCATGACATGTG
ACAATGAAGTTGAATTGAAGAAAATTGCACGTAATCACCCAAATGCCAAGGTCTTACTACATATTGCAACAGAAGATAAT
ATTGGAGGTGAAGAGGGTAACATGAAGTTTGGCACGACCCTGAAGAACTGTAGGCATCTCTTGGAATGTGCTAAGGAACT
TGATGTCCAAATTATTGGGGTTAAATTTCATGTTTCAAGTGCTTGCAAAGAATCTCAAGCATATGTACATGCTCTGTCTG
ATGCTCGATGTGTGTTTGACATGGCTGGAGAATTTGGCTTCACAATGAACATGTTAGACATTGGAGGAGGCTTCACAGGA
ACTGAATTTCAATTGGAAGAGGTTAATCATGTTATCAGCCCTTTGTTGGATATCTACTTTCCTGAAGAATCTGGCATTAA
GATAATTTCAGAACCTGGAAGCTACTATGTGTCTTCTGCATTTACACTTGCAGTTAATATCGTTGCAAAGAAAGTTGTTG
AAAATGATAAATTATGCTCTGGAGTAGAAAAAACCGGAAGTGATGAGCCAGCCTTCATGTATTACATGAACGATGGTGTT
TATGGTTTTGCAAGTAAACTGTCTGAGGACTTAAATACCTTTCCAGAGGTTCACAAGGCAAAGAAATACAAGGAAGATGA
GCCTCTGTTTACAAGCAGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAACTGTCTTCTTCCTGAGC
TGAATGTGGGAGATTGGCTTATCTTTGATAACATGGGAGCGGATTCTTTCCATGAACCATCTGCTTTTAATGATTTTCAG
AGGCCAGCTGTTTATTACATGATGTCATTTAGTGATTGGTATGAGATGCAAGATGCTGGGATTACTTCAGACACAATGAT
GAAGAACTATTTCTTTGTGCCTTCTTGCATTCAGCTGAGCCAAGAAGACAGCTTTTCCACTGAAGCTTAA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 25 .32 RPM
SRP021940_cerebellum 43 .31 RPM
SRP021940_embryo 28 .72 RPM
SRP021940_placental_villous 61 .68 RPM
SRP021940_synovial_membrane 17 .57 RPM
SRP021940_testis 26 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005164 ortholog_one2one 2 retrogenes
retro_chof_1086, retro_chof_1522,
Equus caballus ENSECAG00000022690 within_species_paralog 2 retrogenes
retro_ecab_1002, retro_ecab_957,
Oryctolagus cuniculus ENSOCUG00000015196 ortholog_one2one 1 retrogene
retro_ocun_1439,
Tursiops truncatus ENSTTRG00000000140 ortholog_one2one 1 retrogene
retro_ttru_1210,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_1096 88.96 70.38
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000016922 retrocopies