Parental gene: | SYS1-DBNDD2, ENSDNOG00000011943 |
| Aliases: | None |
| Description: | SYS1-DBNDD2 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:33535] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2572:80514..97053(+) |
>ENSDNOG00000011943
ATGGCGGGCCAGTTCCGCAGCTACGTGTGGGATCCGTTGCTGATCATGTCGCAGATCGTCCTCATGCAGACCGTCTATTA
CGGCTCGCTGGGTCTGTGGCTGGCGCTGGTGGACGGGCTGGTGCGCAGCAGCCCTTCGCTGGACCAGATGTTCGACGCTG
AGATCCTGGGCTTCTCCACCCCTCCAGGACGGCTCTCCATGATGTCCTTCATCCTCAATGCCCTCACCTGTGCCCTGGGC
TTGCTGTACTTCATCCGGCGAGGGAAGCAGTGTCTGGATTTCACTGTCACTGTCCATTTCTTTCACCTTCTGGGCTGCTG
GTTCTACAGCTCCCGTTTTCCCTCGGCGCTGACCTGGTGGCTTGTCCAAGCTGTGTGCATTGCACTCATGGCTGTCATCG
GGGAGTACCTGTGCATGCGGACGGAGCTCAAGGAGATCCCCCTCAACTCAGCCCCTAAATCCAATGTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 21 .59 RPM |
| SRP012922_cerebellum | 24 .47 RPM |
| SRP012922_heart | 12 .99 RPM |
| SRP012922_kidney | 17 .80 RPM |
| SRP012922_liver | 60 .37 RPM |
| SRP012922_lung | 26 .12 RPM |
| SRP012922_quadricep_muscle | 13 .85 RPM |
| SRP012922_spleen | 28 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000014613 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000008154 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1417 | 90.51 | 100.00 | Please wait, loading  |
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| 2. | retro_dnov_1562 | 91.08 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000011943 retrocopies