Parental gene:

TRAPPC13, ENSDNOG00000006386

Aliases:None
Description:trafficking protein particle complex 13 [Source:HGNC Symbol;Acc:25828]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1969:70872..126407(+)


>ENSDNOG00000006386
ATGTTGACTTTACCACAAAATTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGATCTTCAGACAAGTTCTCAGCGTTTAAATCTTTCAGCCTCCAATG
CTGCAGTTGCTGAACTTAAACCTGATTGTTGTATTGATGATGTCATACATCATGAAGTAAAGGAAATTGGAACACACATC
TTGGTGTGTGCAGTGAGTTATACAACTCAGAGTGGAGAAAAAATGTATTTTAGAAAATTCTTCAAATTTCAGGTTCTCAA
ACCATTGGATGTGAAAACCAAGTTTTACAATGCAGAGGTAAGTATTGTTAATATGACTACCGATGAAGTCTTTCTTGAAG
CCCAGATTCAGAACATTACAACCTCACCCATGTTTATGGAGAAGGTTTCCCTGGAGCCATCTATAATGTACAATGTAGCA
GAACTAAATTCTGTCAACCAAGCTGGCGAATGTGTGTCTACATTTGGGTCAAGAGCATATTTGCAGCCAATGGATACACG
CCAGTACTTATACTGCCTAAAGCCCAAGAAGGAATTTTCAGAAAAGGCAGGCATCATTAAGGGAGTAACAGTAATTGGAA
AATTAGATATAGTGTGGAAAACAAATCTCGGTGAAAGGGGAAGGTTACAGACCAGCCAGCTTCAAAGAATGGCTCCAGGT
TATGGAGATGTTAGGTTGTCTTTGGAGGCAATCCCAGATACCGTAAACCTAGAAGAACCTTTTCATATTACCTGTAAAAT
AACAAACTGCAGTGAAAGGACTATGGATCTTGTTTTGGAAATGTGCAATACCAATTCTATCCACTGGTGTGGCATTTCAG
GAAGACAGCTTGGAAAGCTGCATCCAAGTTCTTCTCTCTGCCTTGCCCTTACTCTACTGTCTTCAGTACAGGGACTGCAA
AGTGTCTCCGGCTTAAGACTAACAGACACGTTCTTAAAGAGAACCTATGAATATGATGACATTGCACAAGTCTGTGTGGT
ATCTTCGGCCATTAAAGTGGAAAGCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 9 .92 RPM
SRP012922_cerebellum 27 .49 RPM
SRP012922_heart 5 .80 RPM
SRP012922_kidney 7 .67 RPM
SRP012922_liver 6 .19 RPM
SRP012922_lung 12 .37 RPM
SRP012922_quadricep_muscle 9 .17 RPM
SRP012922_spleen 13 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006026 ortholog_one2one 1 retrogene
retro_chof_1834,
Equus caballus ENSECAG00000011983 ortholog_one2one 1 retrogene
retro_ecab_1074,
Pteropus vampyrus ENSPVAG00000008275 ortholog_one2one 1 retrogene
retro_pvam_980,
Sorex araneus ENSSARG00000000639 ortholog_one2one 1 retrogene
retro_sara_394,
Ictidomys tridecemlineatus ENSSTOG00000021318 ortholog_one2one 1 retrogene
retro_itri_1455,
Tarsius syrichta ENSTSYG00000004582 ortholog_one2one 1 retrogene
retro_tsyr_18,
Tursiops truncatus ENSTTRG00000006537 ortholog_one2one 1 retrogene
retro_ttru_1068,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1288 60.89 56.62
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Download FASTA sequences of all ENSDNOG00000006386 retrocopies