Parental gene: | PSMD6, ENSDNOG00000005852 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 [Source:HGNC Symbol;Acc:9564] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4994:1215..48390(-) |
>ENSDNOG00000005852
ATGCCGCTGGAGAACTTGGAGGAAGAGGGTCTGCCCAAGAACCCCGACCTTCGCATCGCTCAGCTGCGCTTCCTGCTCAG
CCTGCCGGAGCACCGTGGGGACACGGCCGTGCGCGACGAGCTGATGGCGGCCGTCCGCGATAACAATATGGCCCCTTACT
ATGAAGCCTTGTGCAAATCTCTTGACTGGCAGATGGACATGGACCTCCTCAATAAAATGAAGAAGGCAAATGAAGAAGAG
TTGAAACGTTTGGATGAAGAGCTGGAAGATGCAGAGAAGAATCTGGGAGAGAGCGAAATCCGTGATGCAATGATGACAAA
GGCCGAGTACCTCTGTCGGATAGGTGACAAGGAGGGAGCCCTGACAGCCTTTCGCAAGACATATGACAAAACCGTGGCCT
TGGGTCACCGACTGGATATTGTGTTCTATCTCCTCAGGATTGGTTTATTTTATATGGATAATGATCTTATCACACGAAAT
ACAGAAAAGGCCAAAAGTTTAATAGAGGAAGGAGGAGACTGGGACAGGAGAAACCGCTTAAAAGTGTATCAAGGTCTTTA
TTGTGTGGCTATTCGTGATTTCAAACAGGCTGCTGAACTCTTTCTTGACACTGTTTCCACATTTACATCCTATCTCGATT
ATAAAACCTTTGTGACTTATACTGTCTATGTCAGCATGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTACTC
AGTTTTCTTCCAGTCATTAGCTATTGTGGAACAAGAAATGAAAAAGGACTGGCTTTTTGCTCCTCATTATCGATACTATG
TAAGAGAAATGAGAATTCATGCATACAGCCAGCTGCTGGAATCATATAGGTCATTAACTCTTGGTTATATGGCAGAAGCT
TTTGGTGTTGGTGTGGAATTCATTGATCAGGAACTCTCCAGATATATTGCTGCTGGGAGGCTACACTGCAAAATAGATAA
AGTGAATGAAATAGTAGAAACCAACAGACCTGATAGCAAGAACTGGCAGTACCAAGAAACTATCAAGAAAGGAGATCTGC
TACTAAACAGAGTCCAAAAACTTTCCAGAGTAATTAATATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 41 .81 RPM |
| SRP012922_cerebellum | 21 .86 RPM |
| SRP012922_heart | 29 .93 RPM |
| SRP012922_kidney | 33 .68 RPM |
| SRP012922_liver | 20 .74 RPM |
| SRP012922_lung | 33 .45 RPM |
| SRP012922_quadricep_muscle | 34 .62 RPM |
| SRP012922_spleen | 29 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tupaia belangeri | ENSTBEG00000008485 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_672 | 97.38 | 58.40 | Please wait, loading  |
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Download FASTA sequences of all ENSDNOG00000005852 retrocopies