Parental gene:

AGPAT5, ENSDNOG00000004979

Aliases:None
Description:1-acylglycerol-3-phosphate O-acyltransferase 5 [Source:HGNC Symbol;Acc:20886]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4519:625..112168(+)


>ENSDNOG00000004979
GTGCTGCTGTCGCTGGTGCTGCTCGCGTCCTCGCTGCGCCGCGTGCTGCCGGCCGCCGTGCTGCTGGGCTCGGCGCCCAC
CTACGTGCTGGCCTGGGGCGCCTGGCGCCTGCTGTCCTGCCTGCTGCCCGCGCGCTGCTACCGCGCGCTCGACGACCGCC
TCTACTGCGTCTACCAGAGCATGGTGCTCTTCTTCTTCGAGAACTACACCGGCGTGCAGATATTGCTATATGGGGATTTG
CCAAAAAATAAAGAAAATATAATATATTTATCAAATCATCAAAGCACAGTTGACTGGATCGTTGCTGACATTTTGGCCAT
CAGACAGAACGCGCTGGGCCACGTGCGCTATGTGTTGAAGGACGGGCTGAAGTGGCTTCCACTGTACGGGTGTTATTTTT
CTCAGCATGGAGGAATCTATGTAAAGCGAAGTGCCAAATTTAATGAAAAAGAAATGCGAAACAAGCTGCAGAGCCACATG
AAAGCAGGAACTCCAATGTTTCTTGTGATTTTTCCAGAGGGAACAAGGTATAATCCGGAACTAACAAAAGTCATTTCAGC
TAGTCAAACATTTGCTGCTCAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGCTTATAG
AATTCTATGATTCACTGGATCCAGAAAGAAGAAACAAATTTCCTGGGAAAAGTGTTAATTCCAAACTAAGTCTCAAGAAG
ACTTTACCATCATTGTTGCTCTTAAGTGGTTTGACTGCTAGCATGCTTATGACAGAGGCTGGAAGGAAACTCTATGTGAA
AACGTGGATCTATGGAACCGTCATTGGCTGCTTATGGGTTAGCATTAAAGCTTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 22 .36 RPM
SRP012922_cerebellum 6 .74 RPM
SRP012922_heart 2 .78 RPM
SRP012922_kidney 4 .93 RPM
SRP012922_liver 4 .80 RPM
SRP012922_lung 5 .19 RPM
SRP012922_quadricep_muscle 3 .12 RPM
SRP012922_spleen 10 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005142 ortholog_one2one 1 retrogene
retro_chof_376,
Dipodomys ordii ENSDORG00000008708 ortholog_one2one 1 retrogene
retro_dord_523,
Otolemur garnettii ENSOGAG00000008958 ortholog_one2one 1 retrogene
retro_ogar_3477,
Ochotona princeps ENSOPRG00000014343 ortholog_one2one 3 retrogenes
retro_opri_343, retro_opri_829, retro_opri_935,
Pongo abelii ENSPPYG00000018320 ortholog_one2one 1 retrogene
retro_pabe_3671,
Sarcophilus harrisii ENSSHAG00000000051 ortholog_one2one 1 retrogene
retro_shar_687,
Tupaia belangeri ENSTBEG00000013084 ortholog_one2one 1 retrogene
retro_tbel_2948,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_823 94.39 53.57
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000004979 retrocopies