sp|Q39044|VPEB_ARATH ----> Vacuolar-processing enzyme beta-isozyme
Intron 1 GTGAGTGAAG ... AAATGACCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.24 | 61 | 0.3 | 24 |
| A2 | 33.33 | 38 | 6.7 | 19 |
| A3 | 29.31 | 41 | 0 | 17 |
| A4 | 37.5 | 35 | 0 | 21 |
| A5 | 26.32 | 28 | 3.7 | 10 |
| A6 | 25 | 81 | 0.7 | 27 |
| A7 | 17.59 | 89 | 0 | 19 |
| A8 | 29.27 | 58 | 0 | 24 |
| A9 | 20.66 | 96 | 0 | 25 |
| A10 | 25.9 | 103 | 0 | 36 |
>TRINITY_DN122856_c0_g2_i7 from sample A1 / Example spliced isoformCCCAATTGTGCATGAGACGATCGATGACACATGCCAGGATGCCAGCGTGTTAAGGGTTGTGAGCCCACGTAATTAATAAATGAAAATACGGAGGGCATCGCCGAAATGCCTGTGTGACGGAAGATGAAGACTTTTTATTTTCTCGTCATTATAGAAGGTCCGATTATGGGCTGAAATCCAATGCTTTCGATATAATTTTT
CTCTAATCACAGTGTCTACTGTGTTATGCGCCGCCTCTGTATTTCTGTGATGGGTTCTTCCAAGGGATTTCAACTAGGTCTGCTGTGTTATTTTCTTCTGCTGTCGCTGGATTTCAGTAAAGTTGCAGATGGGGCCAGAAGGGATTGGGATTCTCTACTAAAAATGCCCACCAAGAATGTTGATGATGATAGTGATAGGA
TTGGTACTCACTGGGCTGTTCTGTTGGCTGGTTCCTCTGGTTATTGGAACTACAGACATCAGGCTGATATCTGCCATGCCTACCAAATTCTGAGGAGAGGCGGTTTGAAAGAAGAAAACATTGTGGTGTTTATGTATGACGACATTGCTTACGATGAAGAAAATCCTTACCCTGGTACAATTATAAACCATCCCCAAGGT
AGAGATGTCTATGCAGGCGTCCCTAAGGACTACACAGGCGACGATGTTACTGTGAATAATTTTTTTGCTGCTCTTCTTGGAAATAAAAGTTTATTAACGGGCGGAAGTGGAAAAGTTGTTGAAAGTGGCCCCAATGATCGAATATTCATTTACTACTCTGATCATGGAGGTCCTGGAGTGCTTGGAATGCCTCTTCCACC
TTATCTTTATGCAGATGATTTTGTACAAGTCCTGAAGAAGAAGCATGATGCTGGTTCCTATAGAGAAATGGTGATATATGTTGAAGCATGTGAAAGTGGAAGTATTTTTGAAGGTCTGCTGCCAACAGACCTGAATATATATGTTACAACAGCATCAAATGCTGAGGAGAACAGCTGGGGAACATACTGTCCTGGAATGG
ACTCCCCTCCACCTCCAGAATATGACACCTGTCTTGGAGATCTTTATAGTGTTGCATGGATGGAAGACAGTGAAAGCAACAACTTGAAAGAGGAAACCTTGTTGCAACAATATGACCTAGTGAAGCAAAGAACCTCCAACCATAATACATACATGTCTGGCTCTCATGTTATGCAATATGGCAATGTCACTATCAGCCAA
GAGGAATTGTATCTATATATGGGATTTGACTCTGCCAATTCTAATGCTAATTTGGTCCTCGAGAACTCACCACCCTTAGAAAAGAAGGAAGTGAAGGCAATTAATCAACGAGATGCAGATCTTCTTTACATGTGGCAAAAGTATAAGAAATCGAAGGAGGACTCTCCAGAAAGGTCCACAGCACAGACACAATTATTGGA
GTTCATGACTCATCGTATGCATGTAGACAAGAGTGTAAATCTTGTTGGAAATCTTTTATTTGGACAAGAAAAGGGTCCTGCTGTTTTAAAAGCTGTGAGACCTCAAGGGGAACCTTTGGTAGATGATTGGGACTGTCTTAAGAAAATGGTAACATTATATTTTCATTTCTTTCTGTCTTCCTCTGCCCTTCATATCTGCT
>TRINITY_DN122856_c0_g2_i1 from sample A1 / Example unspliced isoform:TGGTTCCTATAGAGAAATGgtgagtgaaggcagctaaagcgtttttttagtgtcactgtcatttatgcattaccagctctatgcaatctcggtggatgtaaagtttgaggtttgatacgtatgaatgaaatacaatcttgtaggttattactttgagtttatgctgtattagaagcttgatatgtggttcaaagcaggca
tggtcagatttctaacataggctgttgaggaggttaatgttgtttaaatgaccagGTGATATATGTTGAAGCATGTGAAAGTGGAAGTATTTTTGAAGGTCTGCTGCCAACAGACCTGAATATATATGTTACAACAGCATCAAATGCTGAGGAGAACAGCTGGGGAACATACTGTCCTGGAATGGACTCCCCTCCACCTC
CAGAATATGACACCTGTCTTGGAGATCTTTATAGTGTTGCATGGATGGAAGACAGGTTTGACTTTACCTCTTTGTTTACTTTGCATTTGATTCCAGAATCCATTTATAGCAAATAATTTATGGGCCTTTCTTCGTTGCATTGACAGTGAAAGCAACAACTTGAAAGAGGAAACCTTGTTGCAACAATATGACCTAGTGAA
GCAAAGAACCTCCAACCATAATACATACATGTCTGGCTCTCATGTTATGCAATATGGCAATGTCACTATCAGCCAAGAGGAATTGTATCTATATATGGGATTTGACTCTGCCAATTCTAATGCTAATTTGGTCCTCGAGAACTCACCACCCTTAGAAAAGAAGGAAGTGAAGGCAATTAATCAACGAGATGCAGATCTTC
TTTACATGTGGCAAAAGTATAAGAAATCGAAGGAGGACTCTCCAGAAAGGTCCACAGCACAGACACAATTATTGGAGTTCATGACTCATCGTATGCATGTAGACAAGAGTGTAAATCTTGTTGGAAATCTTTTATTTGGACAAGAAAAGGGTCCTGCTGTTTTAAAAGCTGTGAGACCTCAAGGGGAACCTTTGGTAGAT
GATTGGGACTGTCTTAAGAAAATGGTACGGACTTTTGAAGGACATTGTGGATCTCTAGCCCAGTATGGCATGAAACACATGCGTGCTCTGGCAAATATATGCAATGAAGGTATCAGCATGGATACTATGGCTGCAGTTTCTGCTGAAGCATGCACTCAACTGCCGGCAGGGTCCTGGAGTTCCCTTCAAAGAGGGTTCAG
CGCTTGATAATTCAAGGCTTTTAAAGTCCTTCCAATGAGTACTATCAAGATCTCAAGAGACAGTTTCTACGATGGAATTTTATGTGCATATAAAACATTGTTGCTTTGTCTTTTTCTGAAAAGAAAGAGAAACGTCCAGTCGTATTGGCATCTTAGCCAAAATTCTTTCTTTATCTACTTCATACAGAAACTGGAGTATA
TA
Intron 2 GTTTGACTTT ... GCATTGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.58 | 60 | 11 | 24 |
| A2 | 23.64 | 42 | 7 | 19 |
| A3 | 26.79 | 41 | 11 | 19 |
| A4 | 25 | 45 | 8 | 22 |
| A5 | 17.14 | 29 | 5 | 7 |
| A6 | 20.14 | 113 | 19 | 38 |
| A7 | 17.03 | 134 | 14 | 41 |
| A8 | 21.97 | 87 | 9 | 40 |
| A9 | 23.64 | 105 | 20 | 45 |
| A10 | 17.58 | 136 | 13 | 45 |
>TRINITY_DN122856_c0_g2_i7 from sample A1 / Example spliced isoformCCCAATTGTGCATGAGACGATCGATGACACATGCCAGGATGCCAGCGTGTTAAGGGTTGTGAGCCCACGTAATTAATAAATGAAAATACGGAGGGCATCGCCGAAATGCCTGTGTGACGGAAGATGAAGACTTTTTATTTTCTCGTCATTATAGAAGGTCCGATTATGGGCTGAAATCCAATGCTTTCGATATAATTTTT
CTCTAATCACAGTGTCTACTGTGTTATGCGCCGCCTCTGTATTTCTGTGATGGGTTCTTCCAAGGGATTTCAACTAGGTCTGCTGTGTTATTTTCTTCTGCTGTCGCTGGATTTCAGTAAAGTTGCAGATGGGGCCAGAAGGGATTGGGATTCTCTACTAAAAATGCCCACCAAGAATGTTGATGATGATAGTGATAGGA
TTGGTACTCACTGGGCTGTTCTGTTGGCTGGTTCCTCTGGTTATTGGAACTACAGACATCAGGCTGATATCTGCCATGCCTACCAAATTCTGAGGAGAGGCGGTTTGAAAGAAGAAAACATTGTGGTGTTTATGTATGACGACATTGCTTACGATGAAGAAAATCCTTACCCTGGTACAATTATAAACCATCCCCAAGGT
AGAGATGTCTATGCAGGCGTCCCTAAGGACTACACAGGCGACGATGTTACTGTGAATAATTTTTTTGCTGCTCTTCTTGGAAATAAAAGTTTATTAACGGGCGGAAGTGGAAAAGTTGTTGAAAGTGGCCCCAATGATCGAATATTCATTTACTACTCTGATCATGGAGGTCCTGGAGTGCTTGGAATGCCTCTTCCACC
TTATCTTTATGCAGATGATTTTGTACAAGTCCTGAAGAAGAAGCATGATGCTGGTTCCTATAGAGAAATGGTGATATATGTTGAAGCATGTGAAAGTGGAAGTATTTTTGAAGGTCTGCTGCCAACAGACCTGAATATATATGTTACAACAGCATCAAATGCTGAGGAGAACAGCTGGGGAACATACTGTCCTGGAATGG
ACTCCCCTCCACCTCCAGAATATGACACCTGTCTTGGAGATCTTTATAGTGTTGCATGGATGGAAGACAGTGAAAGCAACAACTTGAAAGAGGAAACCTTGTTGCAACAATATGACCTAGTGAAGCAAAGAACCTCCAACCATAATACATACATGTCTGGCTCTCATGTTATGCAATATGGCAATGTCACTATCAGCCAA
GAGGAATTGTATCTATATATGGGATTTGACTCTGCCAATTCTAATGCTAATTTGGTCCTCGAGAACTCACCACCCTTAGAAAAGAAGGAAGTGAAGGCAATTAATCAACGAGATGCAGATCTTCTTTACATGTGGCAAAAGTATAAGAAATCGAAGGAGGACTCTCCAGAAAGGTCCACAGCACAGACACAATTATTGGA
GTTCATGACTCATCGTATGCATGTAGACAAGAGTGTAAATCTTGTTGGAAATCTTTTATTTGGACAAGAAAAGGGTCCTGCTGTTTTAAAAGCTGTGAGACCTCAAGGGGAACCTTTGGTAGATGATTGGGACTGTCTTAAGAAAATGGTAACATTATATTTTCATTTCTTTCTGTCTTCCTCTGCCCTTCATATCTGCT
>TRINITY_DN122856_c0_g2_i1 from sample A1 / Example unspliced isoform:TGGTTCCTATAGAGAAATGGTGAGTGAAGGCAGCTAAAGCGTTTTTTTAGTGTCACTGTCATTTATGCATTACCAGCTCTATGCAATCTCGGTGGATGTAAAGTTTGAGGTTTGATACGTATGAATGAAATACAATCTTGTAGGTTATTACTTTGAGTTTATGCTGTATTAGAAGCTTGATATGTGGTTCAAAGCAGGCA
TGGTCAGATTTCTAACATAGGCTGTTGAGGAGGTTAATGTTGTTTAAATGACCAGGTGATATATGTTGAAGCATGTGAAAGTGGAAGTATTTTTGAAGGTCTGCTGCCAACAGACCTGAATATATATGTTACAACAGCATCAAATGCTGAGGAGAACAGCTGGGGAACATACTGTCCTGGAATGGACTCCCCTCCACCTC
CAGAATATGACACCTGTCTTGGAGATCTTTATAGTGTTGCATGGATGGAAGACAGgtttgactttacctctttgtttactttgcatttgattccagaatccatttatagcaaataatttatgggcctttcttcgttgcattgacagTGAAAGCAACAACTTGAAAGAGGAAACCTTGTTGCAACAATATGACCTAGTGAA
GCAAAGAACCTCCAACCATAATACATACATGTCTGGCTCTCATGTTATGCAATATGGCAATGTCACTATCAGCCAAGAGGAATTGTATCTATATATGGGATTTGACTCTGCCAATTCTAATGCTAATTTGGTCCTCGAGAACTCACCACCCTTAGAAAAGAAGGAAGTGAAGGCAATTAATCAACGAGATGCAGATCTTC
TTTACATGTGGCAAAAGTATAAGAAATCGAAGGAGGACTCTCCAGAAAGGTCCACAGCACAGACACAATTATTGGAGTTCATGACTCATCGTATGCATGTAGACAAGAGTGTAAATCTTGTTGGAAATCTTTTATTTGGACAAGAAAAGGGTCCTGCTGTTTTAAAAGCTGTGAGACCTCAAGGGGAACCTTTGGTAGAT
GATTGGGACTGTCTTAAGAAAATGGTACGGACTTTTGAAGGACATTGTGGATCTCTAGCCCAGTATGGCATGAAACACATGCGTGCTCTGGCAAATATATGCAATGAAGGTATCAGCATGGATACTATGGCTGCAGTTTCTGCTGAAGCATGCACTCAACTGCCGGCAGGGTCCTGGAGTTCCCTTCAAAGAGGGTTCAG
CGCTTGATAATTCAAGGCTTTTAAAGTCCTTCCAATGAGTACTATCAAGATCTCAAGAGACAGTTTCTACGATGGAATTTTATGTGCATATAAAACATTGTTGCTTTGTCTTTTTCTGAAAAGAAAGAGAAACGTCCAGTCGTATTGGCATCTTAGCCAAAATTCTTTCTTTATCTACTTCATACAGAAACTGGAGTATA
TA